RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SDR39U1Q9NRG7 319 aaPredicted RBP18.76■□□□□ 0.59
CHMP6-204ENST00000572778 ICE1Q9Y2F5 2266 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 UTP20O75691 2785 aaKnown RBP18.75■□□□□ 0.59
CHMP6-204ENST00000572778 UQCRHLA0A096LP55 91 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 IL6P05231 212 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 GSNP06396 782 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 OR12D1P0DN82 309 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 GRNP28799 593 aaKnown RBP18.75■□□□□ 0.59
CHMP6-204ENST00000572778 STARP49675 285 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 GFRA1P56159 465 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 STX1BP61266 288 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 SRYQ05066 204 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 LRRC74AQ0VAA2 488 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 SF3B4Q15427 424 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■■□□□ 13.7
CHMP6-204ENST00000572778 ZNF630Q2M218 657 aaPredicted RBP18.75■□□□□ 0.59
CHMP6-204ENST00000572778 FLYWCH1Q4VC44 716 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 RAET1LQ5VY80 246 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 SAXO2Q658L1 398 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 ZNF787Q6DD87 383 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 TRIML2Q8N7C3 387 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 ZNF527Q8NB42 609 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 THOC1Q96FV9 657 aaKnown RBP18.75■□□□□ 0.59
CHMP6-204ENST00000572778 HOXD1Q9GZZ0 328 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 HHATLQ9HCP6 504 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 EXD2Q9NVH0 621 aa18.75■□□□□ 0.59
CHMP6-204ENST00000572778 IGLV3-32A0A0A0MS00 114 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 CHMP24386 653 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 CHRNB4P30926 498 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 DCTP40126 519 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 CDKN2CP42773 168 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 RNF144AP50876 292 aaPredicted RBP18.74■□□□□ 0.59
CHMP6-204ENST00000572778 POLR2JP52435 117 aaKnown RBP18.74■□□□□ 0.59
CHMP6-204ENST00000572778 GANABQ14697 944 aaKnown RBP18.74■□□□□ 0.59
CHMP6-204ENST00000572778 ACSF3Q4G176 576 aaPredicted RBP18.74■□□□□ 0.59
CHMP6-204ENST00000572778 ATAD3BQ5T9A4 648 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 TNFAIP8L2Q6P589 184 aaPredicted RBP18.74■□□□□ 0.59
CHMP6-204ENST00000572778 C16orf62Q7Z3J2 963 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 ZNF614Q8N883 585 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 OR9I1Q8NGQ6 314 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 PHOSPHO1Q8TCT1 267 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 MIPOL1Q8TD10 442 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 XAGE5Q8WWM1 108 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 RAB8BQ92930 207 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 NEURL3Q96EH8 262 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 C1GALT1C1Q96EU7 318 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 SH3YL1Q96HL8 342 aaPredicted RBP18.74■□□□□ 0.59
CHMP6-204ENST00000572778 TRIB1Q96RU8 372 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 SDF2Q99470 211 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 CCDC28BQ9BUN5 200 aa18.74■□□□□ 0.59
CHMP6-204ENST00000572778 A0A1W2PQD3 144 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 FAM90A27PA6NNH2 459 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 CYSRT1A8MQ03 144 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 KDM4EB2RXH2 506 aaPredicted RBP18.73■□□□□ 0.59
CHMP6-204ENST00000572778 FAM47E-STBD1D6RA91 191 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 H0Y3Z8 333 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 RFXANKO14593 260 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 EPPINO95925 133 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 AGR2O95994 175 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 AK1P00568 194 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 CPN1P15169 458 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 MSX1P28360 303 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 ADH7P40394 386 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 KHKP50053 298 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 ATP12AP54707 1039 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 B3GALT5-AS1P59052 145 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 RCAN2Q14206 197 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 CD226Q15762 336 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 HSP90B2PQ58FF3 399 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 MISPQ8IVT2 679 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 CHDHQ8NE62 594 aaPredicted RBP18.73■□□□□ 0.59
CHMP6-204ENST00000572778 OR5M1Q8NGP8 315 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 RMND5AQ9H871 391 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 CHST11Q9NPF2 352 aa18.73■□□□□ 0.59
CHMP6-204ENST00000572778 SPTBN1Q01082 2364 aaKnown RBP18.73■□□□□ 0.59
CHMP6-204ENST00000572778 DNAJC13O75165 2243 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 A0A0G2JNJ9 132 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 C1QCP02747 245 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 ZFP36L2P47974 494 aaKnown RBP18.72■□□□□ 0.59
CHMP6-204ENST00000572778 LHX2P50458 406 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 GPR68Q15743 365 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 ARHGAP11BQ3KRB8 267 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 TIGD2Q4W5G0 525 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 RIPPLY2Q5TAB7 128 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 ARSKQ6UWY0 536 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 DNAJC14Q6Y2X3 702 aaPredicted RBP18.72■□□□□ 0.59
CHMP6-204ENST00000572778 SEM1Q6ZVN7 128 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 OLIG3Q7RTU3 272 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 RNF130Q86XS8 419 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 LACC1Q8IV20 430 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 LILRB4Q8NHJ6 448 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 VPS33AQ96AX1 596 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 UCK2Q9BZX2 261 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 Q9UFV3 132 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 VDAC3Q9Y277 283 aa18.72■□□□□ 0.59
CHMP6-204ENST00000572778 FAM234BA2RU67 622 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 H3BNH8 94 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 HCRTR2O43614 444 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 EDF1O60869 148 aaKnown RBP18.71■□□□□ 0.59
CHMP6-204ENST00000572778 STX11O75558 287 aa18.71■□□□□ 0.59
CHMP6-204ENST00000572778 ANP32DO95626 131 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms