RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CHMP24386 653 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 HTR1EP28566 365 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 GFRA1P56159 465 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 ZNF630Q2M218 657 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 DCST2Q5T1A1 773 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 AAGABQ6PD74 315 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 MISPQ8IVT2 679 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 CLEC4FQ8N1N0 589 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 TRIML2Q8N7C3 387 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 OR5D16Q8NGK9 328 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 OR10Q1Q8NGQ4 319 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 MIPOL1Q8TD10 442 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 WDYHV1Q96HA8 205 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 MARK4Q96L34 752 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 PANX1Q96RD7 426 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 CHST11Q9NPF2 352 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 TCF7L2Q9NQB0 619 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 SDR39U1Q9NRG7 319 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 CAMK2AQ9UQM7 478 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
HERPUD1-218ENST00000569569 CENPEQ02224 2701 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 A0A1W2PQD3 144 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 AGR2O95994 175 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 AK1P00568 194 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 CPN1P15169 458 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 HK1P19367 917 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 MSX1P28360 303 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 CHRNB4P30926 498 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 IDH3AP50213 366 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 ATP12AP54707 1039 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 RPS26P62854 115 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 CDSNQ15517 529 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 GLYR1Q49A26 553 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 DCST1Q5T197 706 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 SAXO2Q658L1 398 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 MIER2Q8N344 545 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 ZNF527Q8NB42 609 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 CHDHQ8NE62 594 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 LILRB4Q8NHJ6 448 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 ZPLD1Q8TCW7 415 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 NEURL3Q96EH8 262 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 C1GALT1C1Q96EU7 318 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 SFXN2Q96NB2 322 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 SDF2Q99470 211 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 EBF4Q9BQW3 602 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 SLC35A5Q9BS91 424 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 CCDC28BQ9BUN5 200 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 OR51I1Q9H343 314 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 SERHL2Q9H4I8 314 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 EXD2Q9NVH0 621 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 ZNF446Q9NWS9 450 aa12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 RPH3AQ9Y2J0 694 aaPredicted RBP12.53□□□□□ -0.4
HERPUD1-218ENST00000569569 CCDC154A6NI56 674 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 LINC01387J3KSC0 135 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 GRNP28799 593 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 CHI3L1P36222 383 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 DCTP40126 519 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 ZFP36L2P47974 494 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 STARP49675 285 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 LHX2P50458 406 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 POLR2JP52435 117 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 AQP5P55064 265 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 RCAN2Q14206 197 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 ARHGAP11BQ3KRB8 267 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 ACSF3Q4G176 576 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 FLYWCH1Q4VC44 716 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 RIPPLY2Q5TAB7 128 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF621Q6ZSS3 439 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 MTERF4Q7Z6M4 381 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 LACC1Q8IV20 430 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 CCDC71Q8IV32 467 aaPredicted RBP12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 XAGE5Q8WWM1 108 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 CALHM2Q9HA72 323 aa12.52□□□□□ -0.41
HERPUD1-218ENST00000569569 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 H3BNH8 94 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 RFXANKO14593 260 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 STX11O75558 287 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 OR12D1P0DN82 309 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 PEPDP12955 493 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 TCEA1P23193 301 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 TIMP3P35625 211 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 ADH7P40394 386 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 CDKN2CP42773 168 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 MRPL19P49406 292 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 CASP9P55211 416 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 B3GALT5-AS1P59052 145 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 STX1BP61266 288 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 TXNL4AP83876 142 aaKnown RBP12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 SRYQ05066 204 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 HSPB2Q16082 182 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 BCL2A1Q16548 175 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 KLHL26Q53HC5 615 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 ATAD3BQ5T9A4 648 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 RAET1LQ5VY80 246 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 NSUN5P2Q63ZY6 315 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 HEPHL1Q6MZM0 1159 aa12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 TNFAIP8L2Q6P589 184 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-218ENST00000569569 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms