RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RPS26P11Q5JNZ5 115 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-224ENST00000568877 PDZK1Q5T2W1 519 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 REEP3Q6NUK4 255 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 IGSF10Q6WRI0 2623 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 ZZZ3Q8IYH5 903 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 PGAM4Q8N0Y7 254 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 BBS10Q8TAM1 723 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 OIT3Q8WWZ8 545 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 ZG16BQ96DA0 208 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 REXO5Q96IC2 774 aaKnown RBP15.3■□□□□ 0.04
COMMD4-224ENST00000568877 ZNF597Q96LX8 424 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 ZNF583Q96ND8 569 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 TTTY12Q9BZ98 90 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 QRSL1Q9H0R6 528 aaKnown RBP15.3■□□□□ 0.04
COMMD4-224ENST00000568877 PIF1Q9H611 641 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 NDE1Q9NXR1 346 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 DSPPQ9NZW4 1301 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 SUCOQ9UBS9 1254 aaKnown RBP15.3■□□□□ 0.04
COMMD4-224ENST00000568877 DTNAQ9Y4J8 743 aa15.3■□□□□ 0.04
COMMD4-224ENST00000568877 CENPVL1A0A0U1RR11 272 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 AGAP5A6NIR3 686 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 LRRC3CA6NJW4 275 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 TTLL8A6PVC2 850 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 H3BNH8 94 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 NME4O00746 187 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 GNB5O14775 395 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 SNPHO15079 494 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 NDUFB5O43674 189 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 GLSO94925 669 aaPredicted RBP15.29■□□□□ 0.04
COMMD4-224ENST00000568877 CRYABP02511 175 aaKnown RBP15.29■□□□□ 0.04
COMMD4-224ENST00000568877 PRB1P04280 392 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 ELAVL4P26378 380 aaKnown RBP15.29■□□□□ 0.04
COMMD4-224ENST00000568877 C17orf67Q0P5P2 114 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 HYAL4Q2M3T9 481 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 VMACQ2NL98 169 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 FNDC7Q5VTL7 733 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 TIGD3Q6B0B8 471 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 FAM180AQ6UWF9 173 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 C16orf89Q6UX73 402 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 MISPQ8IVT2 679 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 ZNF614Q8N883 585 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 WDSUB1Q8N9V3 476 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 GATSQ8NAP1 163 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 HIPK4Q8NE63 616 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 OR1J4Q8NGS1 313 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 DUSP19Q8WTR2 217 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 SNRNP40Q96DI7 357 aaKnown RBP15.29■□□□□ 0.04
COMMD4-224ENST00000568877 GNRHR2Q96P88 292 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 HHATLQ9HCP6 504 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 SPAG4Q9NPE6 437 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 PPP4R1LQ9P1A2 415 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 TMEM181Q9P2C4 612 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 ABCD2Q9UBJ2 740 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 RALYQ9UKM9 306 aaKnown RBP15.29■□□□□ 0.04
COMMD4-224ENST00000568877 ANGPT4Q9Y264 503 aa15.29■□□□□ 0.04
COMMD4-224ENST00000568877 SERINC4A6NH21 518 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 EIF4E1BA6NMX2 242 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 FAM220BPB1ANY3 271 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 ACOT7O00154 380 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 SUV39H1O43463 412 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 DBIP07108 87 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 ETS2P15036 469 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 ZNF24P17028 368 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 ENDOUP21128 410 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 RPS4Y1P22090 263 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 PCGF2P35227 344 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 CPOXP36551 454 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 RNF144AP50876 292 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 EEFSECP57772 596 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 PPIAP62937 165 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 LIPEQ05469 1076 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 PRR30Q53SZ7 412 aaPredicted RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 RNFT1Q5M7Z0 435 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 OR5M10Q6IEU7 315 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 ERICH5Q6P6B1 374 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 C6orf89Q6UWU4 347 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 RINLQ6ZS11 566 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 HMGN2P46Q86SG4 172 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 SLC22A16Q86VW1 577 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 IFNEQ86WN2 208 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 PLCZ1Q86YW0 608 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 SLC30A8Q8IWU4 369 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 PEX5LQ8IYB4 626 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 RBM15BQ8NDT2 890 aaKnown RBP15.28■□□□□ 0.04
COMMD4-224ENST00000568877 OR2T12Q8NG77 320 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 PHOSPHO1Q8TCT1 267 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 ADA2Q9NZK5 511 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 B4GALT7Q9UBV7 327 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 USP22Q9UPT9 525 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 NTNG1Q9Y2I2 539 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 HRH3Q9Y5N1 445 aa15.28■□□□□ 0.04
COMMD4-224ENST00000568877 IGLV3-32A0A0A0MS00 114 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 C17orf51A8MQB3 221 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 RFPL3SP0C7P2 107 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 IL7RP16871 459 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 ADH7P40394 386 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 ALDH6A1Q02252 535 aaKnown RBP15.27■□□□□ 0.04
COMMD4-224ENST00000568877 FGFBP1Q14512 234 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 CD226Q15762 336 aa15.27■□□□□ 0.04
COMMD4-224ENST00000568877 KRT73Q86Y46 540 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms