RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 TUBAL3A6NHL2 446 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 TTC36A6NLP5 189 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 NPIPA7E9PJI5 369 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 SEC14L5O43304 696 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 EFNA2O43921 213 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 AQP8O94778 261 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 CHEK2O96017 543 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 CGAP01215 116 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 OPN1LWP04000 364 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 NGFRP08138 427 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 NPIPA8P0DM63 369 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 G6PDP11413 515 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 IL11P20809 199 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 GCKP35557 465 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 ASMTP46597 345 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 SERPINB4P48594 390 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 SORDQ00796 357 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 FAM27E3Q08E93 113 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 GANABQ14697 944 aaKnown RBP13.23□□□□□ -0.29
USB1-210ENST00000565151 LASP1Q14847 261 aaKnown RBP13.23□□□□□ -0.29
USB1-210ENST00000565151 CTU2Q2VPK5 515 aaKnown RBP13.23□□□□□ -0.29
USB1-210ENST00000565151 SZRD1Q7Z422 152 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 LSRQ86X29 649 aaPredicted RBP13.23□□□□□ -0.29
USB1-210ENST00000565151 CLEC4FQ8N1N0 589 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 ZNF781Q8N8C0 355 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 ZFP28Q8NHY6 868 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 ADGRG7Q96K78 797 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 PPP3R2Q96LZ3 170 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 ZFP3Q96NJ6 502 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 SORT1Q99523 831 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 PINK1Q9BXM7 581 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 CXXC4Q9H2H0 198 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 PLEKHF2Q9H8W4 249 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 RNF122Q9H9V4 155 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
USB1-210ENST00000565151 SDHAF3Q9NRP4 125 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 ZCCHC3Q9NUD5 404 aaKnown RBP13.23□□□□□ -0.29
USB1-210ENST00000565151 VDAC3Q9Y277 283 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 PLEKHA6Q9Y2H5 1048 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 DSCAMO60469 2012 aa13.23□□□□□ -0.29
USB1-210ENST00000565151 SLC22A20A6NK97 555 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 TNFRSF21O75509 655 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 KCNH1O95259 989 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 C6orf47O95873 294 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 HRGP04196 525 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 SHC1P29353 583 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 CCKARP32238 428 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 SERPINB5P36952 375 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 PHC1P78364 1004 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 PLPPR5Q32ZL2 321 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 GLYR1Q49A26 553 aaPredicted RBP13.22□□□□□ -0.29
USB1-210ENST00000565151 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.22□□□□□ -0.29
USB1-210ENST00000565151 LRIG3Q6UXM1 1119 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 OR5P2Q8WZ92 322 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 SMPDL3BQ92485 455 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 OPN3Q9H1Y3 402 aaPredicted RBP13.22□□□□□ -0.29
USB1-210ENST00000565151 C3orf14Q9HBI5 128 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 RAB21Q9UL25 225 aa13.22□□□□□ -0.29
USB1-210ENST00000565151 SETD2Q9BYW2 2564 aaPredicted RBP13.22□□□□□ -0.29
USB1-210ENST00000565151 C2CD3Q4AC94 2353 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 NPIPB9F8W1W9 429 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 NDUFB5O43674 189 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.29
USB1-210ENST00000565151 ALOX5P09917 674 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 NID1P14543 1247 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 HPCAL1P37235 193 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 PRIM2P49643 509 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 PSMD4P55036 377 aaKnown RBP13.21□□□□□ -0.29
USB1-210ENST00000565151 HBA1P69905 142 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 PON3Q15166 354 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 POU4F3Q15319 338 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 CHI3L2Q15782 390 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 NDUFAF6Q330K2 333 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 CPTPQ5TA50 214 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 CDC73Q6P1J9 531 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 ZCCHC12Q6PEW1 402 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 CBLN3Q6UW01 205 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 R3HCC1LQ7Z5L2 792 aaKnown RBP13.21□□□□□ -0.29
USB1-210ENST00000565151 KIF18BQ86Y91 864 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 NUDCD3Q8IVD9 361 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 CLECL1Q8IZS7 167 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 METTL25Q8N6Q8 603 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 FNDC5Q8NAU1 212 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 TUBGCP3Q96CW5 907 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 SH3YL1Q96HL8 342 aaPredicted RBP13.21□□□□□ -0.29
USB1-210ENST00000565151 PPP1R36Q96LQ0 422 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 BTBD2Q9BX70 525 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 PIGUQ9H490 435 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 PTGES2Q9H7Z7 377 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 AKTIPQ9H8T0 292 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 MED17Q9NVC6 651 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 GIN1Q9NXP7 522 aa13.21□□□□□ -0.29
USB1-210ENST00000565151 MRTO4Q9UKD2 239 aaKnown RBP13.21□□□□□ -0.29
USB1-210ENST00000565151 PACSIN3Q9UKS6 424 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms