RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 DCLRE1BQ9H816 532 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 SP140LQ9H930 580 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 NDE1Q9NXR1 346 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CGNQ9P2M7 1197 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 CACNG5Q9UF02 275 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 SUN2Q9UH99 717 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 BAIAP2L1Q9UHR4 511 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 TRMT6Q9UJA5 497 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 HOOK1Q9UJC3 728 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 SH3GLB1Q9Y371 365 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 PYGO1Q9Y3Y4 419 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 CPQQ9Y646 472 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 MYH4Q9Y623 1939 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 OTOGLQ3ZCN5 2332 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 TEP1Q99973 2627 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 TPRP12270 2363 aaKnown RBP3.16□□□□□ -1.9
HERC1-215ENST00000561436 ZNF462Q96JM2 2506 aa3.16□□□□□ -1.9
HERC1-215ENST00000561436 LOC105371242A0A075B767 164 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 A0A087WWV3 80 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 RNF103-CHMP3A0A140T963 221 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 BICDL2A1A5D9 508 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 GTPBP10A4D1E9 387 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 ARHGAP42A6NI28 874 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ZNF233A6NK53 670 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 C10orf142B7Z368 130 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 E9PMD0 336 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 TMX2-CTNND1H3BSU7 103 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 RNF103O00237 685 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 EEF2KO00418 725 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 TRAFD1O14545 582 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 CHEK1O14757 476 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SIGLEC5O15389 551 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 MLNRO43193 412 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 COCHO43405 550 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 B4GAT1O43505 415 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 LDOC1O95751 146 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 CHRNGP07510 517 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 MBL2P11226 248 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 UGT1A6P19224 532 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 IL10P22301 178 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ACP1P24666 158 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 PDHA2P29803 388 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 TNFSF9P41273 254 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 NUMBP49757 651 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 TPMTP51580 245 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 C21orf59P57076 290 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SSTP61278 116 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 CCZ1BP86790 482 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 CCZ1P86791 482 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 TFAMQ00059 246 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 CDKL1Q00532 357 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ENPEPQ07075 957 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 HSPA14Q0VDF9 509 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ZNF177Q13360 481 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 PDE7AQ13946 482 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 TMEM187Q14656 261 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 FASTKD3Q14CZ7 662 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 HEPACAMQ14CZ8 416 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 TRADDQ15628 312 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 TTC31Q49AM3 519 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 CCDC92Q53HC0 331 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 TAF1BQ53T94 588 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 CNSTQ6PJW8 725 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 LRRTM1Q86UE6 522 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 UNC93AQ86WB7 457 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 CATSPERDQ86XM0 798 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 WDR49Q8IV35 697 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 STHQ8IWL8 128 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SFRP1Q8N474 314 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 NEK11Q8NG66 645 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 OR6M1Q8NGM8 313 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 OR6F1Q8NGZ6 308 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 OR2T3Q8NH03 318 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 OR4A16Q8NH70 328 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 C8orf46Q8TAG6 207 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 GOLGA5Q8TBA6 731 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 RNASE8Q8TDE3 154 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 TAF4BQ92750 862 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 GLYATL1Q969I3 302 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 FBXO32Q969P5 355 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SYAP1Q96A49 352 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 PCED1BQ96HM7 432 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 HPDLQ96IR7 371 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 LGMNQ99538 433 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SSX3Q99909 188 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SPAG8Q99932 426 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 MCRIP2Q9BUT9 160 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 NACA2Q9H009 215 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 GANQ9H2C0 597 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ZNF665Q9H7R5 613 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 NMUR1Q9HB89 426 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 CSNK1G1Q9HCP0 422 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 DMAP1Q9NPF5 467 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 HOMER3Q9NSC5 361 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 RBAKQ9NYW8 714 aaPredicted RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 TRIM10Q9UDY6 481 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 STOML2Q9UJZ1 356 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 MRTO4Q9UKD2 239 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 PILRAQ9UKJ1 303 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms