RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ERVK-21P61565 698 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 C11orf96Q7Z7L8 435 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 PTP4A1Q93096 173 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 TM4SF18Q96CE8 201 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 TTTY10Q9BZA0 68 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 TTYH1Q9H313 450 aaPredicted RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 LRRN3Q9H3W5 708 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 WDR26Q9H7D7 661 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 MARK1Q9P0L2 795 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 ACSL5Q9ULC5 683 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 GPR55Q9Y2T6 319 aaPredicted RBP15.42■□□□□ 0.06
TPM1-228ENST00000560975 NPTNQ9Y639 398 aa15.42■□□□□ 0.06
TPM1-228ENST00000560975 NUMA1Q14980 2115 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 PDCD5O14737 125 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 UGT2B7P16662 529 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 MAZP56270 477 aaKnown RBP15.41■□□□□ 0.06
TPM1-228ENST00000560975 ERVFC1P60507 584 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 TMEM255AQ5JRV8 349 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 TXNDC8Q6A555 127 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 NKAIN4Q8IVV8 208 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 CFAP206Q8IYR0 622 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 ACBD7Q8N6N7 88 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 CNOT9Q92600 299 aaKnown RBP15.41■□□□□ 0.06
TPM1-228ENST00000560975 ARMC5Q96C12 935 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 ZCCHC3Q9NUD5 404 aaKnown RBP15.41■□□□□ 0.06
TPM1-228ENST00000560975 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 SLC5A10A0PJK1 596 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 DAPL1A0PJW8 107 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 KRBOX1C9JBD0 128 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 PIP5K1CO60331 668 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 KDM4BO94953 1096 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 UBL3O95164 117 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 GDNFP39905 211 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 PGGHGQ32M88 737 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 CXXC5Q7LFL8 322 aaKnown RBP15.41■□□□□ 0.06
TPM1-228ENST00000560975 LRRC56Q8IYG6 542 aaPredicted RBP15.41■□□□□ 0.06
TPM1-228ENST00000560975 C17orf47Q8NEP4 570 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 ABHD4Q8TB40 342 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 GANCQ8TET4 914 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 LDAHQ9H6V9 325 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 NEUROD4Q9HD90 331 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 RCE1Q9Y256 329 aa15.41■□□□□ 0.06
TPM1-228ENST00000560975 H7C4K7 107 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 ARPC1BO15143 372 aaKnown RBP15.4■□□□□ 0.06
TPM1-228ENST00000560975 RAD52P43351 418 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 MMP15P51511 669 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 OR5M10Q6IEU7 315 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 C22orf39Q6P5X5 142 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 Q6ZVU0 165 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 OVCH2Q7RTZ1 564 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 TTLQ8NG68 377 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 OR11G2Q8NGC1 345 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 PIGXQ8TBF5 258 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 BCL7CQ8WUZ0 217 aaPredicted RBP15.4■□□□□ 0.06
TPM1-228ENST00000560975 SAMD8Q96LT4 415 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 ZNF416Q9BWM5 594 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 TEX10Q9NXF1 929 aaPredicted RBP15.4■□□□□ 0.06
TPM1-228ENST00000560975 ZNF69Q9UC07 566 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 COPS3Q9UNS2 423 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 PI15O43692 258 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 ATF1P18846 271 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 F8A1P23610 371 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 IFNGR2P38484 337 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 ARHGDIBP52566 201 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 HTR4Q13639 388 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 KLF9Q13886 244 aaPredicted RBP15.4■□□□□ 0.06
TPM1-228ENST00000560975 HSD17B12Q53GQ0 312 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 HACD4Q5VWC8 232 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 DGLUCYQ7Z3D6 616 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 SLITRK4Q8IW52 837 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 NRMQ8IXM6 262 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 ZG16BQ96DA0 208 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 DMRTA2Q96SC8 542 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 TRIM36Q9NQ86 728 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 PCDHB16Q9NRJ7 776 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 CPNE7Q9UBL6 633 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 BACE2Q9Y5Z0 518 aa15.4■□□□□ 0.06
TPM1-228ENST00000560975 CASP8AP2Q9UKL3 1982 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 TUBAL3A6NHL2 446 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 GLOD5A6NK44 160 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 ANXA2P2A6NMY6 339 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 J3QLW9 94 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 ZNF19P17023 458 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 RAB3BP20337 219 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 OMPP47874 163 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 CCR8P51685 355 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 LASP1Q14847 261 aaKnown RBP15.39■□□□□ 0.05
TPM1-228ENST00000560975 NHLRC1Q6VVB1 395 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 FAM83HQ6ZRV2 1179 aaPredicted RBP15.39■□□□□ 0.05
TPM1-228ENST00000560975 GET4Q7L5D6 327 aaPredicted RBP15.39■□□□□ 0.05
TPM1-228ENST00000560975 KLHDC8AQ8IYD2 350 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 TIMP4Q99727 224 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 TEX12Q9BXU0 123 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 PLSCR5A0PG75 271 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 ARPC5O15511 151 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 PRKRAO75569 313 aaKnown RBP15.39■□□□□ 0.05
TPM1-228ENST00000560975 NAT2P11245 290 aa15.39■□□□□ 0.05
TPM1-228ENST00000560975 NFYAP23511 347 aaPredicted RBP15.39■□□□□ 0.05
TPM1-228ENST00000560975 TRHRP34981 398 aaPredicted RBP15.39■□□□□ 0.05
TPM1-228ENST00000560975 OC90Q02509 493 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms