RNA–Protein interactions for RNA: ENST00000560731.5

MARK3-222, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-222	ENST00000560731	HIPK1	Q86Z02	1210 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	SLC44A2	Q8IWA5	706 aa	Predicted RBP	7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	METTL27	Q8N6F8	245 aa	Predicted RBP	7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	GEMIN6	Q8WXD5	167 aa	Known RBP	7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	RIT1	Q92963	219 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	VPS50	Q96JG6	964 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	DGAT2	Q96PD7	388 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	OR6C1	Q96RD1	312 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	DIRC2	Q96SL1	478 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	SDF2	Q99470	211 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	LMF2	Q9BU23	707 aa	Known RBP	7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	OSBPL11	Q9BXB4	747 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	OSBPL10	Q9BXB5	764 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	ADAP2	Q9NPF8	381 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	MKKS	Q9NPJ1	570 aa	Predicted RBP	7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	EQTN	Q9NQ60	294 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	POLE3	Q9NRF9	147 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	VNN3	Q9NY84	501 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	RARRES3	Q9UL19	164 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	ABCG2	Q9UNQ0	655 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	SATB2	Q9UPW6	733 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	ENPP4	Q9Y6X5	453 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	DSPP	Q9NZW4	1301 aa		7.15	□□□□□ -1.26
MARK3-222	ENST00000560731	SYNDIG1L	A6NDD5	238 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731		A8MVJ9	347 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	hCG_2039718	K7EN88	272 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SYT5	O00445	386 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	CBFA2T3	O75081	653 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	COQ9	O75208	318 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	NME6	O75414	186 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	DNAJB5	O75953	348 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	H6PD	O95479	791 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	LGI1	O95970	557 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	AK1	P00568	194 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ALPL	P05186	524 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	FES	P07332	822 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ZNF23	P17027	643 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	RHCE	P18577	417 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	FPR1	P21462	350 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	CSTF2	P33240	577 aa	Known RBP eCLIP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	OR1E2	P47887	323 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ALDH3A2	P51648	485 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	IST1	P53990	364 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ERVFRD-1	P60508	538 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PPP2R2B	Q00005	443 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	MED21	Q13503	144 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	DAG1	Q14118	895 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ZNF267	Q14586	743 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	EXOSC7	Q15024	291 aa	Known RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	NRF1	Q16656	503 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	NKAIN1	Q4KMZ8	207 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	GPAT3	Q53EU6	434 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PHF19	Q5T6S3	580 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	C1orf189	Q5VU69	101 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PWWP2B	Q6NUJ5	590 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SHQ1	Q6PI26	577 aa	Known RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	COX15	Q7KZN9	410 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	STK32C	Q86UX6	486 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PPP1R3B	Q86XI6	285 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	NLGN4X	Q8N0W4	816 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	MARVELD2	Q8N4S9	558 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ZNF615	Q8N8J6	731 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	BMPER	Q8N8U9	685 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SMYD1	Q8NB12	490 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SLC38A9	Q8NBW4	561 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	OR7G1	Q8NGA0	311 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	OR52R1	Q8NGF1	315 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PHOSPHO1	Q8TCT1	267 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SPPL2A	Q8TCT8	520 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	DOK4	Q8TEW6	326 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PTPMT1	Q8WUK0	201 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SLC9A6	Q92581	669 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	TFAP2C	Q92754	450 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PROX1	Q92786	737 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ATOH1	Q92858	354 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ZG16B	Q96DA0	208 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	OTUB1	Q96FW1	271 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SENP5	Q96HI0	755 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ZNF354B	Q96LW1	612 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	VSTM2L	Q96N03	204 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	RDH12	Q96NR8	316 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	COL21A1	Q96P44	957 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	ZNF300	Q96RE9	604 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	NR1H4	Q96RI1	486 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	EPYC	Q99645	322 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PINK1	Q9BXM7	581 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	AMBRA1	Q9C0C7	1298 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	RNF32	Q9H0A6	362 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731		Q9H521	79 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	FBXO8	Q9NRD0	319 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	OCIAD1	Q9NX40	245 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	IFT80	Q9P2H3	777 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	FTSJ1	Q9UET6	329 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	IFT52	Q9Y366	437 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	PCDHGA8	Q9Y5G5	932 aa		7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	HEMK1	Q9Y5R4	338 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	MAGED1	Q9Y5V3	778 aa	Predicted RBP	7.14	□□□□□ -1.27
MARK3-222	ENST00000560731	SCN2A	Q99250	2005 aa		7.13	□□□□□ -1.27
MARK3-222	ENST00000560731	KMT2E	Q8IZD2	1858 aa		7.13	□□□□□ -1.27
MARK3-222	ENST00000560731	VSTM2B	A6NLU5	285 aa		7.13	□□□□□ -1.27

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