RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZNF527Q8NB42 609 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 OR8J2Q8NGG1 315 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 OR14L1PQ8NHC6 308 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 FBXO30Q8TB52 745 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 FAM57AQ8TBR7 257 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 RELTQ969Z4 430 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 SLC35G5Q96KT7 338 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 OR52E6Q96RD3 313 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 PANX1Q96RD7 426 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 NODALQ96S42 347 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 STACQ99469 402 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 SIKE1Q9BRV8 207 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 YIPF4Q9BSR8 244 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 HOXD1Q9GZZ0 328 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TP63Q9H3D4 680 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ZNF703Q9H7S9 590 aaPredicted RBP7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ZDHHC11Q9H8X9 412 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ACKR4Q9NPB9 350 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TCF7L2Q9NQB0 619 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 DUSP22Q9NRW4 184 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 EXD2Q9NVH0 621 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 GIN1Q9NXP7 522 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ALKBH4Q9NXW9 302 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 COQ3Q9NZJ6 369 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 PPP4R1LQ9P1A2 415 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 DKKL1Q9UK85 242 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 ABCG2Q9UNQ0 655 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 C15orf41Q9Y2V0 281 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 WIF1Q9Y5W5 379 aa7.62□□□□□ -1.19
PSEN1-209ENST00000553855 TMEM247A6NEH6 219 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 AQP7O14520 342 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 SCO2O43819 266 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 SEMA7AO75326 666 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 TRIM3O75382 744 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 NME6O75414 186 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 UTS2O95399 124 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 PSMG1O95456 288 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 IGHG3P01860 377 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 HOXD4P09016 255 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CYP4B1P13584 511 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 GABRA1P14867 456 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ENDOUP21128 410 aaKnown RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 MATN1P21941 496 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 EVI2BP34910 448 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 TRPC1P48995 793 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 UFM1P61960 85 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 HBA1P69905 142 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 TXNL4AP83876 142 aaKnown RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 FOXO1Q12778 655 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 STX5Q13190 355 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 SLC9B1Q4ZJI4 515 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 SPANXN4Q5MJ08 99 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 BICRALQ6AI39 1079 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CDC73Q6P1J9 531 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ZNF585AQ6P3V2 769 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 AAGABQ6PD74 315 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 EPGNQ6UW88 154 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ENPP6Q6UWR7 440 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 Q6ZPB1 254 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ZNF621Q6ZSS3 439 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CHMP1BQ7LBR1 199 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 C16orf62Q7Z3J2 963 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 C6orf120Q7Z4R8 191 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 WDR53Q7Z5U6 358 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CD163Q86VB7 1156 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 PM20D2Q8IYS1 436 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 OR4N2Q8NGD1 307 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 OR5AK3PQ8NH89 298 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 PSMA8Q8TAA3 256 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CHAC2Q8WUX2 184 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 PIK3R3Q92569 461 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 MAELQ96JY0 434 aaKnown RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 GNRHR2Q96P88 292 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CCDC28BQ9BUN5 200 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 BTBD2Q9BX70 525 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 MRPL18Q9H0U6 180 aaKnown RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 PIGUQ9H490 435 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 RABEP2Q9H5N1 569 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CXorf36Q9H7Y0 433 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 CACYBPQ9HB71 228 aaKnown RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 GALNT9Q9HCQ5 603 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 MRGBPQ9NV56 204 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ZIM2Q9NZV7 527 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 NTMQ9P121 344 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 STOML1Q9UBI4 398 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 BTNL2Q9UIR0 455 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ERRFI1Q9UJM3 462 aaPredicted RBP7.61□□□□□ -1.19
PSEN1-209ENST00000553855 TINAGQ9UJW2 476 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 ZNF835Q9Y2P0 537 aa7.61□□□□□ -1.19
PSEN1-209ENST00000553855 TRBV23-1A0A0A0MS06 115 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 A0A1B0GVC2 190 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 GXYLT2A0PJZ3 443 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 LRRC3CA6NJW4 275 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 E9PLN8 166 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 RFXANKO14593 260 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 WDR1O75083 606 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 KCNK2O95069 426 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 KRT75O95678 551 aa7.6□□□□□ -1.19
PSEN1-209ENST00000553855 HPNP05981 417 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms