RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 RAB10P61026 200 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 PHEXP78562 749 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 MRPS35P82673 323 aaKnown RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 OCRLQ01968 901 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 ILF2Q12905 390 aaKnown RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 LTB4RQ15722 352 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 TRMT12Q53H54 448 aaKnown RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CT45A2Q5DJT8 189 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 C6orf52Q5T4I8 152 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 C6orf163Q5TEZ5 329 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CMC1Q7Z7K0 106 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 GAS2L3Q86XJ1 694 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 MYLK4Q86YV6 388 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 CTAGE4Q8IX94 777 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 TEX9Q8N6V9 391 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 L3MBTL4Q8NA19 623 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 OR6K3Q8NGY3 331 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 STAG3L4Q8TBR4 150 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 MZB1Q8WU39 189 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 TMCO6Q96DC7 493 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 ZBED6CLQ96FA7 236 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF681Q96N22 645 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 OSBPL9Q96SU4 736 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 BCAP29Q9UHQ4 241 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 JRKLQ9Y4A0 524 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 PCDHA9Q9Y5H5 950 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 MAGED1Q9Y5V3 778 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-219ENST00000553488 TGP01266 2768 aa6.5□□□□□ -1.37
ATXN3-219ENST00000553488 PRKDCP78527 4128 aaKnown RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 OR2M5A3KFT3 312 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GOLGA6L10A6NI86 522 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GPRIN2O60269 458 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 SS18L1O75177 396 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 NDUFS7O75251 213 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 NME6O75414 186 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 REM1O75628 298 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 KCNH1O95259 989 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 NAT2P11245 290 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 FCGR2AP12318 317 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 HSD3B2P26439 372 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 IDUAP35475 653 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 FEN1P39748 380 aaKnown RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GP5P40197 560 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 SLC6A8P48029 635 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 PIK3CGP48736 1102 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 PDIA2Q13087 525 aaKnown RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GANABQ14697 944 aaKnown RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 EXOC3L2Q2M3D2 409 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 PGGHGQ32M88 737 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF628Q5EBL2 1059 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 RAET1LQ5VY80 246 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GTF2IRD2BQ6EKJ0 949 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 CHMP1BQ7LBR1 199 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GOLGA7Q7Z5G4 137 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GTF2IRD2Q86UP8 949 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 GGNQ86UU5 652 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 CENPLQ8N0S6 344 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 OR2M3Q8NG83 312 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 OR4K17Q8NGC6 315 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF675Q8TD23 568 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 NEUROG1Q92886 237 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 FBXW5Q969U6 566 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 DACT3Q96B18 629 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 REPS1Q96D71 796 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 DTNBP1Q96EV8 351 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 CNRIP1Q96F85 164 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 VSTM2LQ96N03 204 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ADOQ96SZ5 270 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 SERPINI1Q99574 410 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 CPNE1Q99829 537 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 C19orf24Q9BVV8 132 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 MRPL1Q9BYD6 325 aaKnown RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 RTN4RQ9BZR6 473 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ACTR6Q9GZN1 396 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 OR10A4Q9H209 315 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ANKRA2Q9H9E1 313 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 LRTM1Q9HBL6 345 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 SAYSD1Q9NPB0 183 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 PLSCR4Q9NRQ2 329 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 TMEM160Q9NX00 188 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 PRODH2Q9UF12 536 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ADAM29Q9UKF5 820 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 PPP2R2CQ9Y2T4 447 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 RNF11Q9Y3C5 154 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 ZNF337Q9Y3M9 751 aa6.49□□□□□ -1.37
ATXN3-219ENST00000553488 HEATR1Q9H583 2144 aaKnown RBP6.49□□□□□ -1.37
ATXN3-219ENST00000553488 IGHV4-30-2A0A087WSY4 118 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TCRBV9S1A1TA0A576 114 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 C1orf226A1L170 272 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 C7orf72A4D263 438 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 FAM159BA6NKW6 160 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 H3BML4 177 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 OR7A17O14581 309 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 TBX1O43435 398 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 SCO2O43819 266 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 FADS1O60427 444 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 ERAL1O75616 437 aaKnown RBP6.48□□□□□ -1.37
ATXN3-219ENST00000553488 CD8AP01732 235 aa6.48□□□□□ -1.37
ATXN3-219ENST00000553488 ALDOAP04075 364 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms