RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 SLC25A19Q9HC21 320 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 FGF22Q9HCT0 170 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 PTGFRNQ9P2B2 879 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 GRIP1Q9Y3R0 1128 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 SHISA3A0PJX4 238 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 PRAMEF27A3QJZ7 478 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 TNFRSF10AO00220 468 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 POLR1CO15160 346 aaPredicted RBP10.36□□□□□ -0.75
LINC00661-204ENST00000549354 DNAJB6O75190 326 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 AK4P27144 223 aaPredicted RBP10.36□□□□□ -0.75
LINC00661-204ENST00000549354 MAP2K3P46734 347 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 RAB28P51157 221 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 CCR8P51685 355 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 RHAGQ02094 409 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 CHRNEQ04844 493 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 COL13A1Q5TAT6 717 aaPredicted RBP10.36□□□□□ -0.75
LINC00661-204ENST00000549354 LCN1P1Q5VSP4 162 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 POMZP3Q6PJE2 187 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 IKBIPQ70UQ0 350 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 NKAIN4Q8IVV8 208 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 RAB42Q8N4Z0 105 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 UXS1Q8NBZ7 420 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 PHF7Q9BWX1 381 aaPredicted RBP10.36□□□□□ -0.75
LINC00661-204ENST00000549354 NDUFB11Q9NX14 153 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 HS3ST3A1Q9Y663 406 aa10.36□□□□□ -0.75
LINC00661-204ENST00000549354 POM121BA6NF01 834 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 FAM170BA6NMN3 283 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 E9PQ18 207 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 MPZL2O60487 215 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 TBX19O60806 448 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ALX3O95076 343 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ACADMP11310 421 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 LIMS1P48059 325 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SMSP52788 366 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 PCBP3P57721 371 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 YPEL5P62699 121 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 RPE65Q16518 533 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SLX4IPQ5VYV7 408 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 AMIGO1Q86WK6 493 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR10H4Q8NGA5 316 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR8H1Q8NGG4 311 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 FAM3CQ92520 227 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 UPRTQ96BW1 309 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF582Q96NG8 517 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR2M4Q96R27 311 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 AIF1LQ9BQI0 150 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SARGQ9BW04 601 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF717Q9BY31 904 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 CHRDQ9H2X0 955 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 KIR3DX1Q9H7L2 352 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF624Q9P2J8 865 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ATG4BQ9Y4P1 393 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 HEBP2Q9Y5Z4 205 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SOCS6O14544 535 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SLC30A4O14863 429 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ARHGEF9O43307 516 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR2B3O76000 313 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ADAP00813 363 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 HNRNPA2B1P22626 353 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ACSL1P33121 698 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 RPL3P39023 403 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SRP9P49458 86 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 PRDX1Q06830 199 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 FAPQ12884 760 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ILKQ13418 452 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 GLYR1Q49A26 553 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 FIGNL1Q6PIW4 674 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 C16orf62Q7Z3J2 963 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SLC9B2Q86UD5 537 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 NRMQ8IXM6 262 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 PROKR2Q8NFJ6 384 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR13C5Q8NGS8 318 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR2A1Q8NGT9 310 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SLC35G5Q96KT7 338 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SECISBP2Q96T21 854 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 COQ7Q99807 217 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 MS4A8Q9BY19 250 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 TMEM38AQ9H6F2 299 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 LRRC72A6NJI9 287 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 H0Y8X5 98 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 GTPBP1O00178 669 aaKnown RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 HMGN4O00479 90 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ICMTO60725 284 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 RAB36O95755 333 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 CLUP10909 449 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 C19orf48Q6RUI8 117 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 NEIL3Q8TAT5 605 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 OR1E3Q8WZA6 343 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF764Q96H86 408 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SPATA9Q9BWV2 254 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 SERHL2Q9H4I8 314 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 CD93Q9NPY3 652 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 H2AFY2Q9P0M6 372 aaPredicted RBP10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 FBXL4Q9UKA2 621 aa10.35□□□□□ -0.75
LINC00661-204ENST00000549354 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 MN1Q10571 1320 aaPredicted RBP10.34□□□□□ -0.75
LINC00661-204ENST00000549354 GVINP1Q7Z2Y8 2422 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms