RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 CTBP2P56545 445 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 SLC18A2Q05940 514 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 STX5Q13190 355 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 TAB1Q15750 504 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 CYP27C1Q4G0S4 372 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 SGO1Q5FBB7 561 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 TTC19Q6DKK2 380 aaPredicted RBP11.43□□□□□ -0.58
USP28-212ENST00000544750 MFSD12Q6NUT3 480 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 APOOLQ6UXV4 268 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 ATG4DQ86TL0 474 aaPredicted RBP11.43□□□□□ -0.58
USP28-212ENST00000544750 DTX2Q86UW9 622 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 GABRG1Q8N1C3 465 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 MREGQ8N565 214 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 C1orf52Q8N6N3 182 aaKnown RBP11.43□□□□□ -0.58
USP28-212ENST00000544750 STEAP2Q8NFT2 490 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 OR10H5Q8NGA6 315 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 OR10D3Q8NH80 312 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 GTPBP3Q969Y2 492 aaKnown RBP11.43□□□□□ -0.58
USP28-212ENST00000544750 L3HYPDHQ96EM0 354 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 HBEGFQ99075 208 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 NPAS1Q99742 590 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 TRIM2Q9C040 744 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 ELOVL6Q9H5J4 265 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 FANCFQ9NPI8 374 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 GLRX2Q9NS18 164 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 DCDC2Q9UHG0 476 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 MCM8Q9UJA3 840 aa11.43□□□□□ -0.58
USP28-212ENST00000544750 IGHV4-30-2A0A087WSY4 118 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 A0A1W2PP18 115 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 EIF1AYO14602 144 aaKnown RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 ADAMDEC1O15204 470 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 CLOCKO15516 846 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 PLIN3O60664 434 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 PSMG1O95456 288 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 PLGP00747 810 aaPredicted RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 CD3EP07766 207 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 IL3P08700 152 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 ZNF17P17021 662 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 TAC1P20366 129 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 IMPDH1P20839 514 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 PSMA4P25789 261 aaKnown RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 AGTR1P30556 359 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 CRHR1P34998 444 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 ARL1P40616 181 aaPredicted RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 RAE1P78406 368 aaKnown RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 CLCQ05315 142 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 TMEM249Q2WGJ8 235 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 ZYG11AQ6WRX3 759 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 MARCH3Q86UD3 253 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 TRABD2AQ86V40 505 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 C4orf33Q8N1A6 199 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 RIBC1Q8N443 379 aaPredicted RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 KBTBD8Q8NFY9 601 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 SELENOMQ8WWX9 145 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 TACO1Q9BSH4 297 aaKnown RBP11.42□□□□□ -0.58
USP28-212ENST00000544750 PRRG4Q9BZD6 226 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 GSTO2Q9H4Y5 243 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 MKS1Q9NXB0 559 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 TAS2R9Q9NYW1 312 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 OR10H1Q9Y4A9 318 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 ARFGEF3Q5TH69 2177 aa11.42□□□□□ -0.58
USP28-212ENST00000544750 A0A087WV62 115 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 A0A0J9YW62 118 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 TLDC2A0PJX2 215 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 DPRXA6NFQ7 191 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 ELOA3DA6NLF2 546 aaPredicted RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 CXCL13O43927 109 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 SUPT7LO94864 414 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 OR4F21O95013 312 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 IL33O95760 270 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 OTCP00480 354 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 KRT4P19013 534 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 ADH6P28332 368 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 PRR5P85299 388 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 VLDLRP98155 873 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 BSPH1Q075Z2 132 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 LOXL1Q08397 574 aaPredicted RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 C17orf67Q0P5P2 114 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 FAPQ12884 760 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 TSC22D1Q15714 1073 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 PRSS53Q2L4Q9 553 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 ELOA3BQ3SY89 546 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 TCHHL1Q5QJ38 904 aaPredicted RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 SFRP5Q5T4F7 317 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 FIGNL1Q6PIW4 674 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 TFAP2EQ6VUC0 442 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 STK32CQ86UX6 486 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 EXOC3L1Q86VI1 746 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 SLC22A9Q8IVM8 553 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 SAMD14Q8IZD0 417 aaPredicted RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 GTPBP8Q8N3Z3 284 aaPredicted RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 ELOA3Q8NG57 546 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 PIWIL2Q8TC59 973 aaKnown RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 EXOSC8Q96B26 276 aaKnown RBP11.41□□□□□ -0.58
USP28-212ENST00000544750 TNFRSF13CQ96RJ3 184 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 ZNF382Q96SR6 550 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 C19orf24Q9BVV8 132 aa11.41□□□□□ -0.58
USP28-212ENST00000544750 HDHD5Q9BXW7 423 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms