RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 REEP3Q6NUK4 255 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 APOOLQ6UXV4 268 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PTOV1Q86YD1 416 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZZZ3Q8IYH5 903 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 DEFB107AQ8IZN7 70 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 METTL25Q8N6Q8 603 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HIPK4Q8NE63 616 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BBS10Q8TAM1 723 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PHOSPHO1Q8TCT1 267 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RNF138Q8WVD3 245 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TMEM41AQ96HV5 264 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TAAR6Q96RI8 345 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TTTY12Q9BZ98 90 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RALYQ9UKM9 306 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 A0A1W2PQD3 144 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NPIPB9F8W1W9 429 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NME4O00746 187 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SNPHO15079 494 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TRIM3O75382 744 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CRYABP02511 175 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 IL7RP16871 459 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ELAVL4P26378 380 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 AQP1P29972 269 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GAS1P54826 345 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PPIAP62937 165 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 LIPEQ05469 1076 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 INPP5JQ15735 1006 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF141Q15928 474 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KLHL26Q53HC5 615 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SOWAHCQ53LP3 525 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PRAMEF8Q5VWM4 474 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PRAMEF7Q5VXH5 474 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RINLQ6ZS11 566 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 NET1Q7Z628 596 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC22A16Q86VW1 577 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SLC30A8Q8IWU4 369 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PEX5LQ8IYB4 626 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZFP62Q8NB50 900 aaPredicted RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 OR2T12Q8NG77 320 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 DUSP19Q8WTR2 217 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PMM1Q92871 262 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZG16BQ96DA0 208 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 REXO5Q96IC2 774 aaKnown RBP13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RTN4RQ9BZR6 473 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ALG2Q9H553 416 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZFP64Q9NPA5 681 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 B4GALT7Q9UBV7 327 aa13.23□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CENPVL1A0A0U1RR11 272 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 AGAP5A6NIR3 686 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FAM166BA8MTA8 275 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FAM220BPB1ANY3 271 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GTPBP1O00178 669 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TFECO14948 347 aaPredicted RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GMFGO60234 142 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PGM3O95394 542 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 DBIP07108 87 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GZMMP51124 257 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ALDH6A1Q02252 535 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FOXO1Q12778 655 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 TOMM20Q15388 145 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CD226Q15762 336 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MAPK14Q16539 360 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 VMACQ2NL98 169 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ERICH5Q6P6B1 374 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CALHM3Q86XJ0 350 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KRT73Q86Y46 540 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 WDSUB1Q8N9V3 476 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 WDR60Q8WVS4 1066 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SNRNP40Q96DI7 357 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ZNF583Q96ND8 569 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GNRHR2Q96P88 292 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HHATLQ9HCP6 504 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BCL2L10Q9HD36 194 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 DSPPQ9NZW4 1301 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ABCD2Q9UBJ2 740 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SUCOQ9UBS9 1254 aaKnown RBP13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 KCNE5Q9UJ90 142 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 USP22Q9UPT9 525 aa13.22□□□□□ -0.29
TNFRSF1A-216ENST00000543995 BOD1L1Q8NFC6 3051 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ELOVL7A1L3X0 281 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 SERINC4A6NH21 518 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 C17orf51A8MQB3 221 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 HCRTR2O43614 444 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CYP7B1O75881 506 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PDE9AO76083 593 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 CSTAP01040 98 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ETS2P15036 469 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 ENDOUP21128 410 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 GDF1P27539 372 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PCGF2P35227 344 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 MLLT10P55197 1068 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 EEFSECP57772 596 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 FGFBP1Q14512 234 aa13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 LARS2Q15031 903 aaKnown RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 PRR30Q53SZ7 412 aaPredicted RBP13.21□□□□□ -0.29
TNFRSF1A-216ENST00000543995 INTS11Q5TA45 600 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms