RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 OR2V1Q8NHB1 315 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 RNF145Q96MT1 663 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 MRPL57Q9BQC6 102 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 RAB17Q9H0T7 212 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 MRPL46Q9H2W6 279 aaKnown RBP12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 ALG2Q9H553 416 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 EQTNQ9NQ60 294 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 MIEF1Q9NQG6 463 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 GLRX2Q9NS18 164 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 FBXO34Q9NWN3 711 aa12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
SMARCA4-206ENST00000538456 ESYT3A0FGR9 886 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 GXYLT2A0PJZ3 443 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 MYO1GB0I1T2 1018 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ADAMDEC1O15204 470 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 SSX4O60224 188 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ULK1O75385 1050 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 GCM2O75603 506 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 PSMG1O95456 288 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 F12P00748 615 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 IGKV1D-16P01601 117 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ANXA4P09525 319 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 DDCP20711 480 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 PTNP21246 168 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ME2P23368 584 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 HMOX2P30519 316 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 GABRA3P34903 492 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 PHBP35232 272 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 HSD17B3P37058 310 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 MAGEA12P43365 314 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 PSMD4P55036 377 aaKnown RBP12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 PRR5P85299 388 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 RASA2Q15283 850 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 TEX35Q5T0J7 233 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 C6orf52Q5T4I8 152 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 DNM1P46Q6ZS02 220 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 GABRG1Q8N1C3 465 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 OR2L13Q8N349 312 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 GTPBP8Q8N3Z3 284 aaPredicted RBP12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ABHD3Q8WU67 409 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 PIK3R3Q92569 461 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ACSS3Q9H6R3 686 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 ANK2Q01484 3957 aa12.47□□□□□ -0.41
SMARCA4-206ENST00000538456 IGHV4-30-2A0A087WSY4 118 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 A0A0J9YW62 118 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 SUPT7LO94864 414 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 KCNH1O95259 989 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 INHBAP08476 426 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 SBK3P0C264 359 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 ADH6P28332 368 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 NTSP30990 170 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 SFTPDP35247 375 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF41P51814 821 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 RAC1P63000 192 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 ZNF763Q0D2J5 394 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 C2orf80Q0P641 193 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 PLPPR5Q32ZL2 321 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 TFAP2EQ6VUC0 442 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 GPRIN3Q6ZVF9 776 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 ESPNLQ6ZVH7 1005 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 NUFIP2Q7Z417 695 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 EXOC3L1Q86VI1 746 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 BANPQ8N9N5 519 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 METTL6Q8TCB7 284 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 OSTF1Q92882 214 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 KISS1RQ969F8 398 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 SH3YL1Q96HL8 342 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 KLHDC3Q9BQ90 382 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 LMF2Q9BU23 707 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 C1QTNF3Q9BXJ4 246 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 HDHD5Q9BXW7 423 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 TRIM2Q9C040 744 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 GLIPR2Q9H4G4 154 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 BARX1Q9HBU1 254 aaPredicted RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 NFU1Q9UMS0 254 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 YLPM1P49750 1951 aaKnown RBP12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 PLCE1Q9P212 2302 aa12.46□□□□□ -0.41
SMARCA4-206ENST00000538456 SVEP1Q4LDE5 3571 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 A0A087WZY1 265 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 A0A1W2PRB8 838 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 RAMP1O60894 148 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 SLITRK5O94991 958 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 ADAP00813 363 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 CD8AP01732 235 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 THBS1P07996 1170 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 PSMA4P25789 261 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 SHC1P29353 583 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 CARD18P57730 90 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 SLC18A2Q05940 514 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 ZNF239Q16600 458 aaKnown RBP12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 KRTAP24-1Q3LI83 254 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 UNC50Q53HI1 259 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 SPDYAQ5MJ70 313 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 TMEM201Q5SNT2 666 aa12.45□□□□□ -0.42
SMARCA4-206ENST00000538456 PDSS1Q5T2R2 415 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms