RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 SIGLEC11Q96RL6 698 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 MMP28Q9H239 520 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 NT5DC2Q9H857 520 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 RMI1Q9H9A7 625 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 PALMDQ9NP74 551 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 EVA1BQ9NVM1 165 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 TAS2R7Q9NYW3 318 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CNOT2Q9NZN8 540 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 MUTYHQ9UIF7 546 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CFAP54Q96N23 3096 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 DUXAA6NLW8 204 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 DVL2O14641 736 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 DPM1O60762 260 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 MYF5P13349 255 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 GRPRP30550 384 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 ACVR1BP36896 505 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 SLC15A1P46059 708 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 TRA2BP62995 288 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 DMPKQ09013 629 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 MINDY4Q4G0A6 757 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 DCST2Q5T1A1 773 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 FCRL6Q6DN72 434 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 MRM1Q6IN84 353 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 RNF44Q7L0R7 432 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 OR52R1Q8NGF1 315 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 OR52L1Q8NGH7 329 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 TM9SF4Q92544 642 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 ZNF681Q96N22 645 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 SDF2Q99470 211 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CDCA4Q9BXL8 241 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 BARHL1Q9BZE3 327 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 TRPV4Q9HBA0 871 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 TXNL4BQ9NX01 149 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 LYARQ9NX58 379 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 ZSCAN32Q9NX65 697 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 MRPS7Q9Y2R9 242 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 FABP12A6NFH5 140 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 SNTNA6NMZ2 147 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 GPR89AB7ZAQ6 455 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 SLC30A4O14863 429 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 PRICKLE3O43900 615 aaPredicted RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 SCG5P05408 212 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 GPR89BP0CG08 455 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 GABRG2P18507 467 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 ZNF10P21506 573 aaPredicted RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 NDUFS1P28331 727 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 RPL4P36578 427 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 IL20RBQ6UXL0 311 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 DGAT2L6Q6ZPD8 337 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 ATCAYQ86WG3 371 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CDK20Q8IZL9 346 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 SPRYD4Q8WW59 207 aaPredicted RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 UFD1Q92890 307 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CRNNQ9UBG3 495 aaPredicted RBP8.11□□□□□ -1.11
UBE3B-208ENST00000538070 TNFRSF10DQ9UBN6 386 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 PHF11Q9UIL8 331 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 FBXL4Q9UKA2 621 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CA14Q9ULX7 337 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 STUB1Q9UNE7 303 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 CHST2Q9Y4C5 530 aa8.11□□□□□ -1.11
UBE3B-208ENST00000538070 C2orf74A8MZ97 194 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 J3QLW9 94 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 LALBAP00709 142 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ZNF19P17023 458 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TGM1P22735 817 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FRKP42685 505 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 BTG2P78543 158 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 OR1Q1Q15612 314 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 KLHL22Q53GT1 634 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 PRAMEF17Q5VTA0 474 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 OTPQ5XKR4 325 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 C12orf73Q69YU5 71 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TMEM64Q6YI46 380 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 NRARPQ7Z6K4 114 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 RANBP3LQ86VV4 465 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 NANOGP1Q8N7R0 232 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TMEM163Q8TC26 289 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FANK1Q8TC84 345 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 MMABQ96EY8 250 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TGM7Q96PF1 710 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 SYNDIG1Q9H7V2 258 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 MTHFD2LQ9H903 347 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ANKHQ9HCJ1 492 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 CALML5Q9NZT1 146 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 SEC14L4Q9UDX3 406 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 LIPT1Q9Y234 373 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 FRYLO94915 3013 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 C12orf71A8MTZ7 269 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 ASNA1O43681 348 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 TP53P04637 393 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 GSTM3P21266 225 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 MAOAP21397 527 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 NAA10P41227 235 aaPredicted RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 WNT4P56705 351 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 SNRPGP62308 76 aaKnown RBP8.1□□□□□ -1.11
UBE3B-208ENST00000538070 COX10Q12887 443 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 NKAIN2Q5VXU1 208 aa8.1□□□□□ -1.11
UBE3B-208ENST00000538070 C1orf94Q6P1W5 598 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms