RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 LSM2Q9Y333 95 aaKnown RBP6.17□□□□□ -1.42
USP28-202ENST00000535607 ZNF175Q9Y473 711 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 KIAA1671Q9BY89 1806 aa6.17□□□□□ -1.42
USP28-202ENST00000535607 PATJQ8NI35 1801 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 IGLV3-10A0A075B6K4 115 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TRDV1A0A1B0GX56 115 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 hCG_1807616A0A1W2PRN6 198 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TMEM129A0AVI4 362 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 MYBPHLA2RUH7 354 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 C7orf66A4D0T2 115 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 OR6C75A6NL08 312 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 LOC730098B7Z3J9 87 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 C5orf67F2Z3F1 127 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 H7C4K7 107 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 M0QYG6 137 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 FAAHO00519 579 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SLC16A5O15375 505 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 INSIG1O15503 277 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 FABP7O15540 132 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 AKR7A2O43488 359 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 NDUFA2O43678 99 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 PLOD3O60568 738 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ENTPD6O75354 484 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 PEX14O75381 377 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CSO75390 466 aaKnown RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 DIRAS1O95057 198 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SCAF4O95104 1147 aaKnown RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 OAZ2O95190 189 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TRBC1P01850 177 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 C8GP07360 202 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 GALTP07902 379 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 MYF5P13349 255 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ITGB6P18564 788 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SDC1P18827 310 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ITGALP20701 1170 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 GSTM3P21266 225 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 EPHA2P29317 976 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 RBMS1P29558 406 aaKnown RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 OR1E1P30953 314 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 LCN1P31025 176 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ACSL1P33121 698 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 HMGCLP35914 325 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 IFNGR2P38484 337 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CBX5P45973 191 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 MAPK9P45984 424 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 OR1G1P47890 313 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SLC11A1P49279 550 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 AP1S2P56377 157 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 HMGCS1Q01581 520 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 UBE3AQ05086 875 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 RAB40BQ12829 278 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ILKQ13418 452 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TPBGQ13641 420 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TRAM1Q15629 374 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 EXOC3L2Q2M3D2 409 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 GTDC1Q4AE62 458 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SPIN4Q56A73 249 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 DGKKQ5KSL6 1271 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CLVS2Q5SYC1 327 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SLC22A10Q63ZE4 541 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 LAMTOR1Q6IAA8 161 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 NOXRED1Q6NXP6 359 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 FUT10Q6P4F1 479 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 BHLHB9Q6PI77 547 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TMEM65Q6PI78 240 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SUSD1Q6UWL2 747 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SBSNQ6UWP8 590 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TMEM107Q6UX40 140 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 PAMR1Q6UXH9 720 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 QSOX2Q6ZRP7 698 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 BHLHA9Q7RTU4 235 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CAMKMTQ7Z624 323 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 GALNT10Q86SR1 603 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ANKRD46Q86W74 232 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 LRRC28Q86X40 367 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 PTOV1Q86YD1 416 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TMC8Q8IU68 726 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 LURAP1LQ8IV03 231 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CCDC36Q8IYA8 594 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 SLC39A11Q8N1S5 342 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ZBTB2Q8N680 514 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 ZNF366Q8N895 744 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 AQP11Q8NBQ7 271 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 HJURPQ8NCD3 748 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 LILRB1Q8NHL6 650 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 CLHC1Q8NHS4 586 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 CPT1CQ8TCG5 803 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 C2orf15Q8WU43 125 aaKnown RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 SMG7Q92540 1137 aaKnown RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 NR4A3Q92570 626 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 RFKQ969G6 155 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 RFT1Q96AA3 541 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 IGSF21Q96ID5 467 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 RPRD1AQ96P16 312 aaPredicted RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 MOGAT1Q96PD6 335 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 TSSK3Q96PN8 268 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 KLHL5Q96PQ7 755 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 GFM1Q96RP9 751 aaKnown RBP6.16□□□□□ -1.42
USP28-202ENST00000535607 P2RY13Q9BPV8 354 aa6.16□□□□□ -1.42
USP28-202ENST00000535607 MGME1Q9BQP7 344 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms