RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CRB2Q5IJ48 1285 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CELF3Q5SZQ8 465 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 STRIP1Q5VSL9 837 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 MRNIPQ6NTE8 343 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 KLHL17Q6TDP4 642 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 AFTPHQ6ULP2 937 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 HSDL2Q6YN16 418 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 RASSF6Q6ZTQ3 369 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 DENND5BQ6ZUT9 1274 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ASB18Q6ZVZ8 466 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ERN2Q76MJ5 926 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 SLC16A13Q7RTY0 426 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ZNF551Q7Z340 670 aaPredicted RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 GDF7Q7Z4P5 450 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PXKQ7Z7A4 578 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ADGRA1Q86SQ6 560 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ZC3HC1Q86WB0 502 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 TMC8Q8IU68 726 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PGAM4Q8N0Y7 254 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 LRRC18Q8N456 261 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 C17orf78Q8N4C9 275 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CERS5Q8N5B7 392 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 METTL13Q8N6R0 699 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 L3MBTL4Q8NA19 623 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 OR2T4Q8NH00 348 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ADAMTS14Q8WXS8 1223 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 RASD2Q96D21 266 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ORAI1Q96D31 301 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 YIPF6Q96EC8 236 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PSMB7Q99436 277 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 RBBP8Q99708 897 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 HSD17B14Q9BPX1 270 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 AIF1LQ9BQI0 150 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 LXNQ9BS40 222 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 TMEM208Q9BTX3 173 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 WRAP53Q9BUR4 548 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 FICDQ9BVA6 458 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PARD6GQ9BYG4 376 aaPredicted RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 DPH1Q9BZG8 443 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 NXF3Q9H4D5 531 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 PRDM13Q9H4Q3 707 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 EPHX3Q9H6B9 360 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 WDCPQ9H6R7 721 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 MRPL47Q9HD33 250 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 ABCB9Q9NP78 766 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 SLCO1B3Q9NPD5 702 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 ZNF302Q9NR11 478 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 FAM30AQ9NZY2 134 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 GHRLQ9UBU3 117 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 WNT16Q9UBV4 365 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CHRNA9Q9UGM1 479 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 PPIEQ9UNP9 301 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 ICKQ9UPZ9 632 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 SLC22A13Q9Y226 551 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CDYLQ9Y232 598 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CARHSP1Q9Y2V2 147 aaKnown RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 ZNF337Q9Y3M9 751 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 CLIC4Q9Y696 253 aa5.14□□□□□ -1.59
CD44-236ENST00000533222 COL22A1Q8NFW1 1626 aaPredicted RBP5.14□□□□□ -1.59
CD44-236ENST00000533222 A0A087WWV3 80 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 A0A0G2JND7 137 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 GLYATL1P3A0A0U1RQE8 302 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 A0A1W2PPH5 198 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CLEC18AA5D8T8 446 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 AQP12BA6NM10 295 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 GABRR3A8MPY1 467 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CDRT15L2A8MXV6 281 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ZNF99A8MXY4 864 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 FAM227AF5H4B4 570 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 WWP2O00308 870 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ACOT8O14734 319 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MYL12BO14950 172 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 OGG1O15527 345 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ORC5O43913 435 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 VPS26AO75436 327 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 PRAMEF12O95522 483 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 HKR1P10072 659 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SPP1P10451 314 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 KITP10721 976 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MYL12AP19105 171 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CNR1P21554 472 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 FMO4P31512 558 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MC5RP33032 325 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 GGT2P36268 569 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 MNDAP41218 407 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 QARSP47897 775 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 CDH11P55287 796 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 ARF3P61204 181 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 ADARB1P78563 741 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 ARF1P84077 181 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 SREBF2Q12772 1141 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SLAQ13239 276 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 CDH18Q13634 790 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 BOP1Q14137 746 aaKnown RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 MED22Q15528 200 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 TBCEQ15813 527 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 RFTN2Q52LD8 501 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 SOWAHCQ53LP3 525 aaPredicted RBP5.13□□□□□ -1.59
CD44-236ENST00000533222 ZNF667Q5HYK9 610 aa5.13□□□□□ -1.59
CD44-236ENST00000533222 SIRPB2Q5JXA9 342 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms