RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 ACSM2BQ68CK6 577 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 LETMD1Q6P1Q0 360 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 METTL2BQ6P1Q9 378 aaKnown RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 CLEC2AQ6UVW9 174 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 IL17RELQ6ZVW7 336 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 CCDC91Q7Z6B0 441 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 TUSC5Q8IXB3 177 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 LILRA2Q8N149 483 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 MMGT1Q8N4V1 131 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ARIH2OSQ8N7S6 290 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 METTL6Q8TCB7 284 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 GPR151Q8TDV0 419 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PIK3R3Q92569 461 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 KISS1RQ969F8 398 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ERP27Q96DN0 273 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ADAD1Q96M93 576 aaKnown RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 RNF145Q96MT1 663 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 TNFRSF13CQ96RJ3 184 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 NPAS1Q99742 590 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 CHODLQ9H9P2 273 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 BRF2Q9HAW0 419 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 C3orf14Q9HBI5 128 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 DDX18Q9NVP1 670 aaKnown RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 FAIMQ9NVQ4 179 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 FAM120CQ9NX05 1096 aaKnown RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 PAQR5Q9NXK6 330 aaPredicted RBP8.23□□□□□ -1.09
NEDD8-206ENST00000531430 MCM8Q9UJA3 840 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 POU2F3Q9UKI9 436 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 NFU1Q9UMS0 254 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 ABCG2Q9UNQ0 655 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 B3GALT5Q9Y2C3 310 aa8.23□□□□□ -1.09
NEDD8-206ENST00000531430 CCDC189A1A4V9 331 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 HMX2A2RU54 273 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 STX16-NPEPL1H3BU86 382 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 STX16O14662 325 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 RAD51CO43502 376 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 DLX3O60479 287 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 ULK1O75385 1050 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 LYZL6O75951 148 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 SUPT7LO94864 414 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 KCNH1O95259 989 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 CD8AP01732 235 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 ANXA4P09525 319 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 PABPC4LP0CB38 370 aaKnown RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 ADH6P28332 368 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 AGTR1P30556 359 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 CASP9P55211 416 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 RAC1P63000 192 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 NAB1Q13506 487 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 TRADDQ15628 312 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 AGAP6Q5VW22 663 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 APOOLQ6UXV4 268 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 ESPNLQ6ZVH7 1005 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 BHLHA15Q7RTS1 189 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 SZRD1Q7Z422 152 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 BANPQ8N9N5 519 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 PIWIL2Q8TC59 973 aaKnown RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 ABHD3Q8WU67 409 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 MUCL1Q96DR8 90 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 C11orf24Q96F05 449 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 APIPQ96GX9 242 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 NAPGQ99747 312 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 TRAF4Q9BUZ4 470 aaPredicted RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 CACNG6Q9BXT2 260 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 OR10A4Q9H209 315 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 MANSC1Q9H8J5 431 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 TIGARQ9NQ88 270 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 MIEF1Q9NQG6 463 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 TMCO1Q9UM00 188 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 UTP11Q9Y3A2 253 aaKnown RBP8.22□□□□□ -1.09
NEDD8-206ENST00000531430 CADP27708 2225 aa8.22□□□□□ -1.09
NEDD8-206ENST00000531430 A0A087WZY1 265 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 UPK1AO00322 258 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 ABCD4O14678 606 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 LMX1BO60663 402 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 PRKD3O94806 890 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 NUDT14O95848 222 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 COL6A2P12110 1019 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 SRD5A1P18405 259 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 GPC1P35052 558 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 HSD17B3P37058 310 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 RNF144AP50876 292 aaPredicted RBP8.21□□□□□ -1.1
NEDD8-206ENST00000531430 FABP6P51161 128 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 CDH11P55287 796 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 RAE1P78406 368 aaKnown RBP8.21□□□□□ -1.1
NEDD8-206ENST00000531430 PRR5P85299 388 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 CHRNEQ04844 493 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 CLCQ05315 142 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 C2orf54Q08AI8 447 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 ITGADQ13349 1161 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 NRF1Q16656 503 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 PRSS53Q2L4Q9 553 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 GGTA1PQ4G0N0 100 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 OR4C3Q8NH37 302 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 FBXO30Q8TB52 745 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 FBXO25Q8TCJ0 367 aa8.21□□□□□ -1.1
NEDD8-206ENST00000531430 RNF138Q8WVD3 245 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms