RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 BRD7Q9NPI1 651 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 ACSS1Q9NUB1 689 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-214ENST00000528165 PFDN2Q9UHV9 154 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 PCP4L1A6NKN8 68 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 PI15O43692 258 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 CTSAP10619 480 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 BSGP35613 385 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 AHRP35869 848 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 RPS7P62081 194 aaKnown RBP13.7□□□□□ -0.22
CAPN1-214ENST00000528165 DYRK1AQ13627 763 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 GNA13Q14344 377 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 TRAM1Q15629 374 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 MPP7Q5T2T1 576 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 NDUFAF5Q5TEU4 345 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 MTFR2Q6P444 385 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 GID4Q8IVV7 300 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 ABHD4Q8TB40 342 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 NR4A3Q92570 626 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 MS4A7Q9GZW8 240 aaPredicted RBP13.7□□□□□ -0.22
CAPN1-214ENST00000528165 WDR26Q9H7D7 661 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 SLC25A13Q9UJS0 675 aa13.7□□□□□ -0.22
CAPN1-214ENST00000528165 ANAPC1Q9H1A4 1944 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 J3QRE1 110 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 NUPL2O15504 423 aaKnown RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ALPPL2P10696 532 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 RAB3BP20337 219 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 TBXA2RP21731 343 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 CTAG1AP78358 180 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 KLF9Q13886 244 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 SFRP4Q6FHJ7 346 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 PLBD1Q6P4A8 553 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 TFAP2EQ6VUC0 442 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 GET4Q7L5D6 327 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 TMEM99Q8N816 258 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 OR10H4Q8NGA5 316 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 OR51Q1Q8NH59 317 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 KLK6Q92876 244 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF689Q96CS4 500 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 SIPA1Q96FS4 1042 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 CXorf58Q96LI9 332 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF275Q9NSD4 429 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 MED9Q9NWA0 146 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ENTPD4Q9Y227 616 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 PRR23D1E9PI22 279 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 PRAF2O60831 178 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 TGM6O95932 706 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 MT-ND5P03915 603 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 PRR23D2P0DMB1 279 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 SNRPBP14678 240 aaKnown RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ANXA11P50995 505 aaKnown RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF311Q5JNZ3 666 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 RGS7BPQ6MZT1 257 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ZNF620Q6ZNG0 422 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 TRMT11Q7Z4G4 463 aaKnown RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 CMTM8Q8IZV2 173 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 NDC1Q9BTX1 674 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 ZCCHC2Q9C0B9 1178 aaKnown RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 TEX10Q9NXF1 929 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 CFAP97Q9P2B7 532 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 LRFN2Q9ULH4 789 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 FLVCR2Q9UPI3 526 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 NPFFR2Q9Y5X5 522 aa13.69□□□□□ -0.22
CAPN1-214ENST00000528165 KIF26AQ9ULI4 1882 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-214ENST00000528165 A0A0G2JPF8 293 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SLC22A23A1A5C7 686 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 HNRNPCL2B2RXH8 293 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 HNRNPCL3B7ZW38 293 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 HNRNPCL4P0DMR1 293 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 CD53P19397 219 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 CXCL2P19875 107 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 GCGRP47871 477 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 METTL11BQ5VVY1 283 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 Q6ZTK2 550 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NRMQ8IXM6 262 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SORCS1Q8WY21 1168 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 DIO2Q92813 273 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 IL17FQ96PD4 163 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 SMAD5Q99717 465 aaKnown RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 LDAHQ9H6V9 325 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 IFT46Q9NQC8 304 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 MGAT4CQ9UBM8 478 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 HRH3Q9Y5N1 445 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 ZC3H12DA2A288 527 aaKnown RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 E9PI62 339 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 PLPP2O43688 288 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 TBX6O95947 436 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NDUFV2P19404 249 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 GDNFP39905 211 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 RECQLP46063 649 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 VEGFCP49767 419 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 LASP1Q14847 261 aaKnown RBP13.68□□□□□ -0.22
CAPN1-214ENST00000528165 BAIAP2L2Q6UXY1 529 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 ESPNLQ6ZVH7 1005 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 PRSS45Q7RTY3 260 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 FAM129CQ86XR2 697 aa13.68□□□□□ -0.22
CAPN1-214ENST00000528165 NKAIN4Q8IVV8 208 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms