RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SRRQ9GZT4 340 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 SLC28A3Q9HAS3 691 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 ABCB9Q9NP78 766 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 HINT3Q9NQE9 182 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 CPNE7Q9UBL6 633 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 A0A087WV62 115 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 C10orf142B7Z368 130 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 IGHA1P01876 353 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 CELA2BP08218 269 aaPredicted RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 ZNF10P21506 573 aaPredicted RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 GABRA5P31644 462 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 MAP3K8P41279 467 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 PPP1CAP62136 330 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 YPEL5P62699 121 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 MRPS21P82921 87 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 SHC2P98077 582 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 SFSWAPQ12872 951 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 FZD5Q13467 585 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 KRR1Q13601 381 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 BAK1Q16611 211 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 PRICKLE4Q2TBC4 344 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 CRTC2Q53ET0 693 aaPredicted RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 MRPL2Q5T653 305 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 RNF44Q7L0R7 432 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 OR8H2Q8N162 312 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 FAM181AQ8N9Y4 354 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 GALNT6Q8NCL4 622 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 OR2T33Q8NG76 320 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 RPLP0P6Q8NHW5 317 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 RERGQ96A58 199 aaPredicted RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 DCLRE1CQ96SD1 692 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 KATNB1Q9BVA0 655 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 UBQLN3Q9H347 655 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 MAT2BQ9NZL9 334 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 PAIP2BQ9ULR5 123 aaKnown RBP16.34■□□□□ 0.21
USH1C-205ENST00000527020 SATB2Q9UPW6 733 aa16.34■□□□□ 0.21
USH1C-205ENST00000527020 TRAPPC13A5PLN9 417 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 SOCS6O14544 535 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 HCRTR1O43613 425 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 STX11O75558 287 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 NID1P14543 1247 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 DRD1P21728 446 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 HTR1FP30939 366 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 UBE2IP63279 158 aaKnown RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 EXOSC7Q15024 291 aaKnown RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 GLYR1Q49A26 553 aaPredicted RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 NXNL2Q5VZ03 156 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 HSDL2Q6YN16 418 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 FRMD1Q8N878 549 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 IL17RDQ8NFM7 739 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 OR13H1Q8NG92 308 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 GPBAR1Q8TDU6 330 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 ENKD1Q9H0I2 346 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 DUSP22Q9NRW4 184 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 C20orf141Q9NUB4 165 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 TDRD6O60522 2096 aaKnown RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 SMIM30A4D0T7 59 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 CDHR4A6H8M9 788 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 C2orf74A8MZ97 194 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 SLC30A4O14863 429 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 GPR75O95800 540 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 DBIP07108 87 aaKnown RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 GABRG2P18507 467 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 MAKP20794 623 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 NT5EP21589 574 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 FGF9P31371 208 aaPredicted RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 AKT2P31751 481 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 GCGRP47871 477 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 SLC9A3P48764 834 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 ILF3Q12906 894 aaKnown RBP eCLIP16.33■□□□□ 0.2
USH1C-205ENST00000527020 OR1Q1Q15612 314 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 TMEM44Q2T9K0 475 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 RANBP3LQ86VV4 465 aaPredicted RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 CA13Q8N1Q1 262 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 CDRT4Q8N9R6 151 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 PFN4Q8NHR9 129 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 BRIX1Q8TDN6 353 aaKnown RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 ZFPM2Q8WW38 1151 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 ITFG2Q969R8 447 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 DPH1Q9BZG8 443 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 CACYBPQ9HB71 228 aaKnown RBP16.33■□□□□ 0.2
USH1C-205ENST00000527020 MSRAQ9UJ68 235 aa16.33■□□□□ 0.2
USH1C-205ENST00000527020 TCRBV21S2A2A0A5A6 115 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 FAM183AA6NL82 134 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 J3QRE1 110 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 GALR3O60755 368 aaPredicted RBP16.32■□□□□ 0.2
USH1C-205ENST00000527020 AZGP1P25311 298 aaKnown RBP16.32■□□□□ 0.2
USH1C-205ENST00000527020 DSG2Q14126 1118 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 ZNF791Q3KP31 576 aaPredicted RBP16.32■□□□□ 0.2
USH1C-205ENST00000527020 VASNQ6EMK4 673 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 CPOQ8IVL8 374 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 SIRT6Q8N6T7 355 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 ARIH2OSQ8N7S6 290 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 COX18Q8N8Q8 333 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 PSD4Q8NDX1 1056 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 CHAC2Q8WUX2 184 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 ARSGQ96EG1 525 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 STACQ99469 402 aa16.32■□□□□ 0.2
USH1C-205ENST00000527020 GAS2L1Q99501 681 aaPredicted RBP16.32■□□□□ 0.2
USH1C-205ENST00000527020 OR52D1Q9H346 318 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms