RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 UBE2CO00762 179 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 UBFD1O14562 309 aaKnown RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 SLC30A4O14863 429 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 AZIN1O14977 448 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TOX3O15405 576 aaPredicted RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 KLK10O43240 276 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 RGS14O43566 566 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 OR1F1O43749 312 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 LCMT2O60294 686 aaKnown RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 SRPX2O60687 465 aaPredicted RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 LYPLA1O75608 230 aaPredicted RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 KRT6AP02538 564 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 C9P02748 559 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 KRT6BP04259 564 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CAPN1P07384 714 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CHRNGP07510 517 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 T-ENOLP0DO92 83 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 UROSP10746 265 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CDH1P12830 882 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CEACAM1P13688 526 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PVRP15151 417 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 EPORP19235 508 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 HMOX2P30519 316 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CCR10P46092 362 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CAPZBP47756 277 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 GPR12P47775 334 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 KRT6CP48668 564 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ACADVLP49748 655 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TPD52P55327 224 aaPredicted RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 GFERP55789 205 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PPP1CAP62136 330 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 GNGT1P63211 74 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CSNK1G2P78368 415 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 RELAQ04206 551 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 TRA2AQ13595 282 aaKnown RBP eCLIP4.17□□□□□ -1.74
USP48-211ENST00000526044 SGO1Q5FBB7 561 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CES4AQ5XG92 561 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 GPR139Q6DWJ6 353 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TMIGD1Q6UXZ0 262 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 RGS9BPQ6ZS82 235 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ZNF367Q7RTV3 350 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 NUP54Q7Z3B4 507 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TMPRSS11BQ86T26 416 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 SYVN1Q86TM6 617 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CUZD1Q86UP6 607 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PAQR7Q86WK9 346 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 KMT5CQ86Y97 462 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CRLF3Q8IUI8 442 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 KIRREL3Q8IZU9 778 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 FBXL14Q8N1E6 418 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 DNAJC22Q8N4W6 341 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 L3MBTL4Q8NA19 623 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 OR52B6Q8NGF0 335 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TMEM163Q8TC26 289 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 UTP15Q8TED0 518 aaKnown RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 AGAP11Q8TF27 550 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ZNF382Q96SR6 550 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ZPBPQ9BS86 351 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 EFCAB11Q9BUY7 163 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ITPAQ9BY32 194 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 C20orf27Q9GZN8 174 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 EHD1Q9H4M9 534 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ELOVL6Q9H5J4 265 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 NT5DC2Q9H857 520 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PDE7BQ9NP56 450 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PFDN4Q9NQP4 134 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 AKAP7Q9P0M2 348 aaPredicted RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 TMEM9Q9P0T7 183 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ANKMY1Q9P2S6 941 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ZNF490Q9ULM2 529 aaPredicted RBP4.17□□□□□ -1.74
USP48-211ENST00000526044 SNX6Q9UNH7 406 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 TIMM22Q9Y584 194 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 KLK4Q9Y5K2 254 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 SNX8Q9Y5X2 465 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 PTGDR2Q9Y5Y4 395 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 WDFY4Q6ZS81 3184 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 RP1P56715 2156 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 HEATR5BQ9P2D3 2071 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 CABIN1Q9Y6J0 2220 aa4.17□□□□□ -1.74
USP48-211ENST00000526044 ASCC3Q8N3C0 2202 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 IGKV1-8A0A0C4DH67 115 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 A0A0J9YVX5 310 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SPAARA0A1B0GVQ0 90 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 TRBC2A0A5B9 178 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 OR2A25A4D2G3 310 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SH2D7A6NKC9 451 aaPredicted RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 H0YGG7 62 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 H0YIV9 168 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 SLC28A1O00337 649 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 MANBAO00462 879 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 NTN3O00634 580 aaPredicted RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 TXNDC9O14530 226 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CASC3O15234 703 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 EDF1O60869 148 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 SNNO75324 88 aaPredicted RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 PDYNP01213 254 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 EIF2S1P05198 315 aaKnown RBP4.16□□□□□ -1.74
USP48-211ENST00000526044 SERPIND1P05546 499 aa4.16□□□□□ -1.74
USP48-211ENST00000526044 CHRM4P08173 479 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms