RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 ZNF141Q15928 474 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 C3AR1Q16581 482 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 GLYR1Q49A26 553 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-202ENST00000524475 COQ5Q5HYK3 327 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 C1QL3Q5VWW1 255 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 DNAJC14Q6Y2X3 702 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-202ENST00000524475 DOLPP1Q86YN1 238 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 DUSP19Q8WTR2 217 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 PHF10Q8WUB8 498 aaKnown RBP13.74□□□□□ -0.21
SF3B2-202ENST00000524475 XAGE5Q8WWM1 108 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 ROPN1LQ96C74 230 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 C1GALT1C1Q96EU7 318 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 SLC6A15Q9H2J7 730 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 TP63Q9H3D4 680 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-202ENST00000524475 PTGES2Q9H7Z7 377 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 SAR1AQ9NR31 198 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 SPRR3Q9UBC9 169 aa13.74□□□□□ -0.21
SF3B2-202ENST00000524475 LEF1Q9UJU2 399 aaPredicted RBP13.74□□□□□ -0.21
SF3B2-202ENST00000524475 NCOA6Q14686 2063 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 ASH1LQ9NR48 2969 aaKnown RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 A0A087WZY1 265 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 TRGV8A0A0C4DH27 118 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 PRAMEF27A3QJZ7 478 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 FIGNL2A6NMB9 653 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 E9PLN8 166 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 H3BNH8 94 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 WDR1O75083 606 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 TRAPPC6AO75865 159 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 AGFG2O95081 481 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 ZIC2O95409 532 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 ACTL6AO96019 429 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 LDLRP01130 860 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 SNRPB2P08579 225 aaKnown RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 HOXD4P09016 255 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 DPP4P27487 766 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 LSP1P33241 339 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 GCKP35557 465 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 SUMO3P55854 103 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 GFRA1P56159 465 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 CRYZQ08257 329 aaKnown RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 ZNF630Q2M218 657 aaPredicted RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 GTDC1Q4AE62 458 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 EIPR1Q53HC9 387 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 EMC4Q5J8M3 183 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 PAGE3Q5JUK9 113 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 COX20Q5RI15 118 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 VASNQ6EMK4 673 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 TYW3Q6IPR3 259 aaKnown RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 FRRS1Q6ZNA5 592 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 LRRC74BQ6ZQY2 392 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 GALNT10Q86SR1 603 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 CD163Q86VB7 1156 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 MSRB3Q8IXL7 192 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 RAB8BQ92930 207 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 VKORC1Q9BQB6 163 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 PRDM14Q9GZV8 571 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 DSN1Q9H410 356 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 TAS2R10Q9NYW0 307 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 TINAGQ9UJW2 476 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 NDUFAF1Q9Y375 327 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 WDR45Q9Y484 360 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 PCNX1Q96RV3 2341 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 PHF3Q92576 2039 aaKnown RBP13.73□□□□□ -0.21
SF3B2-202ENST00000524475 PCNX3Q9H6A9 2034 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 DOPEY2Q9Y3R5 2298 aa13.73□□□□□ -0.21
SF3B2-202ENST00000524475 C7orf72A4D263 438 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 NPIPA2E9PIF3 369 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 NPIPA3F8WFD2 350 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 LINC01387J3KSC0 135 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 CLIC1O00299 241 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 ANGPT2O15123 496 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 ZIC3O60481 467 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 FCMRO60667 390 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 C1QCP02747 245 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 TPOP07202 933 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 GABRA1P14867 456 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 CHMP24386 653 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 PTGER4P35408 488 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 DSTNP60981 165 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 HPCAP84074 193 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 STX5Q13190 355 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 TOMM20Q15388 145 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 MAPRE2Q15555 327 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 GXYLT1Q4G148 440 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 WIPI1Q5MNZ9 446 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-202ENST00000524475 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.72□□□□□ -0.21
SF3B2-202ENST00000524475 WLSQ5T9L3 541 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 PRAMEF8Q5VWM4 474 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 PRAMEF7Q5VXH5 474 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 OR5M10Q6IEU7 315 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 DLEU7Q6UYE1 221 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 YRDCQ86U90 279 aaKnown RBP13.72□□□□□ -0.21
SF3B2-202ENST00000524475 IFNEQ86WN2 208 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 ZNF619Q8N2I2 560 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 TOR1AIP2Q8NFQ8 470 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 SSC4DQ8WTU2 575 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
SF3B2-202ENST00000524475 DMRTA2Q96SC8 542 aa13.72□□□□□ -0.21
SF3B2-202ENST00000524475 NSRP1Q9H0G5 558 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms