RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 ROPN1BQ9BZX4 212 aaPredicted RBP4.72□□□□□ -1.65
PABPC1-223ENST00000523636 CTDSP1Q9GZU7 261 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 CENPHQ9H3R5 247 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 RAD21L1Q9H4I0 556 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 CCDC134Q9H6E4 229 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 ROPN1Q9HAT0 212 aaPredicted RBP4.72□□□□□ -1.65
PABPC1-223ENST00000523636 FGF22Q9HCT0 170 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 OR6C3Q9NZP0 311 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 VSX1Q9NZR4 365 aaPredicted RBP4.72□□□□□ -1.65
PABPC1-223ENST00000523636 KLHL8Q9P2G9 620 aaPredicted RBP4.72□□□□□ -1.65
PABPC1-223ENST00000523636 PEF1Q9UBV8 284 aaKnown RBP4.72□□□□□ -1.65
PABPC1-223ENST00000523636 CIDEBQ9UHD4 219 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 LNPEPQ9UIQ6 1025 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 FZD10Q9ULW2 581 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 PPIL1Q9Y3C6 166 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 NOX1Q9Y5S8 564 aa4.72□□□□□ -1.65
PABPC1-223ENST00000523636 A0A087X1B8 175 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 TMEM120BA0PK00 339 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MEX3AA1L020 520 aaKnown RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ANKRD61A6NGH8 418 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ZNF233A6NK53 670 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 AQP7P3A6NL99 342 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 LIN7AO14910 233 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CHUKO15111 745 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ZNF264O43296 627 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 AKAP8O43823 692 aaKnown RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 IDH3BO43837 385 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 KLK8O60259 260 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 FAM20BO75063 409 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CDC123O75794 336 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 NCR1O76036 304 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MYO1DO94832 1006 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 KDM4BO94953 1096 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 FAM107AO95990 144 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 GAS8O95995 478 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 IGLV3-27P01718 113 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 HLA-DRAP01903 254 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 EBLN1P0CF75 366 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 UNGP13051 313 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 F3P13726 295 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MMP9P14780 707 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 PRKACAP17612 351 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 PTNP21246 168 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ATP6V1C1P21283 382 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 GCKP35557 465 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ALDH3B1P43353 468 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 RANBP1P43487 201 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CCR4P51679 360 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SUOXP51687 545 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 F2RL1P55085 397 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 RPS7P62081 194 aaKnown RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SLC25A3Q00325 362 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CDR2Q01850 454 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CALCOCO2Q13137 446 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SLAQ13239 276 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 DYNC1I2Q13409 638 aaKnown RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 TP53BP2Q13625 1128 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 DYRK1AQ13627 763 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CSHL1Q14406 222 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 NFATC4Q14934 902 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 IRF4Q15306 451 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MAPK11Q15759 364 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SNRNP35Q16560 246 aaKnown RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 FAM153CQ494X1 144 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 IQCCQ4KMZ1 466 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MIDNQ504T8 468 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 TTMPQ5BVD1 217 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ZNF311Q5JNZ3 666 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 LCN1P1Q5VSP4 162 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 PRAMEF17Q5VTA0 474 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 DENND2CQ68D51 928 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 WDR74Q6RFH5 385 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ASPGQ86U10 573 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CCDC50Q8IVM0 306 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CDKL3Q8IVW4 592 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 FAM71AQ8IYT1 594 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MARVELD2Q8N4S9 558 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 C12orf29Q8N999 325 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SLC38A9Q8NBW4 561 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 FBXL13Q8NEE6 735 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 OR52B4Q8NGK2 314 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ANGPTL6Q8NI99 470 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 LMO3Q8TAP4 145 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 DNAJB14Q8TBM8 379 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SLC2A14Q8TDB8 520 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CD300LFQ8TDQ1 290 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 NSMCE1Q8WV22 266 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SLC41A3Q96GZ6 507 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 OXNAD1Q96HP4 312 aaPredicted RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 OR2A14Q96R47 310 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 OR6C1Q96RD1 312 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 CCT8L2Q96SF2 557 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 FMO2Q99518 471 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 EGFL8Q99944 293 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 MESP1Q9BRJ9 268 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 TMEM109Q9BVC6 243 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 DDX47Q9H0S4 455 aaKnown RBP4.71□□□□□ -1.66
PABPC1-223ENST00000523636 SDCBP2Q9H190 292 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 UBQLN3Q9H347 655 aa4.71□□□□□ -1.66
PABPC1-223ENST00000523636 ACTR5Q9H9F9 607 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms