RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PROCP04070 461 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 PRPS2P11908 318 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 IL11P20809 199 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 GSTM5P46439 218 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 PTH2RP49190 550 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 PSMD4P55036 377 aaKnown RBP13.82□□□□□ -0.2
MRPS28-209ENST00000522987 PRR5P85299 388 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 GUSBP1Q15486 140 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 TSC22D1Q15714 1073 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 CTU2Q2VPK5 515 aaKnown RBP13.82□□□□□ -0.2
MRPS28-209ENST00000522987 TRMT10CQ7L0Y3 403 aaKnown RBP13.82□□□□□ -0.2
MRPS28-209ENST00000522987 LRRC75A-AS1Q8N1F1 130 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 NUP43Q8NFH3 380 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 OR2T11Q8NH01 316 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 ACMSDQ8TDX5 336 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 ROBO4Q8WZ75 1007 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 JADE3Q92613 823 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 CHMP6Q96FZ7 201 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 C16orf58Q96GQ5 468 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 RNF145Q96MT1 663 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 RRAGDQ9NQL2 400 aaPredicted RBP13.82□□□□□ -0.2
MRPS28-209ENST00000522987 TAS2R7Q9NYW3 318 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 SH3BP4Q9P0V3 963 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 EMC9Q9Y3B6 208 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 AP4B1Q9Y6B7 739 aa13.82□□□□□ -0.2
MRPS28-209ENST00000522987 NPIPA5A0A0B4J1W7 369 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 INAFM1C9JVW0 142 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 NPIPA7E9PJI5 369 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 KLF4O43474 513 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 GLRA3O75311 464 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 SYNGR4O95473 234 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 SHBGP04278 402 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 NPIPA8P0DM63 369 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 SHC1P29353 583 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 SFTPDP35247 375 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 SLC18A2Q05940 514 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.81□□□□□ -0.2
MRPS28-209ENST00000522987 TMEM44Q2T9K0 475 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 GLE1Q53GS7 698 aaKnown RBP13.81□□□□□ -0.2
MRPS28-209ENST00000522987 STAC2Q6ZMT1 411 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 ZNF704Q6ZNC4 412 aaPredicted RBP13.81□□□□□ -0.2
MRPS28-209ENST00000522987 PLEKHM3Q6ZWE6 761 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 TRIM46Q7Z4K8 759 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 LCA5Q86VQ0 697 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 ZNF619Q8N2I2 560 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 SLC16A11Q8NCK7 471 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 PPCDCQ96CD2 204 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 PLPPR2Q96GM1 343 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 BDH2Q9BUT1 245 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 C3orf14Q9HBI5 128 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 LRTM1Q9HBL6 345 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 GIMAP2Q9UG22 337 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 DCDC2Q9UHG0 476 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 CCL27Q9Y4X3 112 aa13.81□□□□□ -0.2
MRPS28-209ENST00000522987 CHD3Q12873 2000 aaKnown RBP13.81□□□□□ -0.2
MRPS28-209ENST00000522987 A0A0J9YW62 118 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 A0A1W2PRB8 838 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 LINC01387J3KSC0 135 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 PLIN3O60664 434 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 SLITRK5O94991 958 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 NKX2-2O95096 273 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 CNOT4O95628 575 aaKnown RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 LINC00032P0C843 101 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 FCGR2AP12318 317 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 SDC1P18827 310 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 ZNF41P51814 821 aaPredicted RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 MANFP55145 182 aaKnown RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 RPL38P63173 70 aaKnown RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 KIAA0040Q15053 153 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 DUSP5Q16690 384 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 GALNTL6Q49A17 601 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 GLYR1Q49A26 553 aaPredicted RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 HBMQ6B0K9 141 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 C20orf204Q6ZNR8 217 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 WDR75Q8IWA0 830 aaKnown RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 IFT20Q8IY31 132 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 LRRN4CLQ8ND94 238 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 MAPK1IP1LQ8NDC0 245 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 ATP6V1C2Q8NEY4 427 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 OR6K3Q8NGY3 331 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 POC1BQ8TC44 478 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 CCDC126Q96EE4 140 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 ACTR6Q9GZN1 396 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 MED17Q9NVC6 651 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 C1orf109Q9NX04 203 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 GIN1Q9NXP7 522 aa13.8□□□□□ -0.2
MRPS28-209ENST00000522987 MCTS1Q9ULC4 181 aaKnown RBP13.8□□□□□ -0.2
MRPS28-209ENST00000522987 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 IGLV3-32A0A0A0MS00 114 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 TMEM233B4DJY2 109 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 OIP5O43482 229 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 KCNK2O95069 426 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 UROSP10746 265 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 CPA3P15088 417 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 PRIM2P49643 509 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 FGFBP1Q14512 234 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 CD226Q15762 336 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 PLPPR5Q32ZL2 321 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 NDUFAF6Q330K2 333 aa13.79□□□□□ -0.2
MRPS28-209ENST00000522987 BEX5Q5H9J7 111 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms