RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 STRCP1A6NGW2 1772 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 TEX13CA0A0J9YWL9 993 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 GPR39O43194 453 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 ZDHHC11BP0C7U3 371 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 GTF2F2P13984 249 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 SPARTQ8N0X7 666 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 DDIT4LQ96D03 193 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 MROQ9BYG7 248 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 SULT1C2O00338 296 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 DNAJB6O75190 326 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 GLULP15104 373 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 CDK5R2Q13319 367 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 GAS6Q14393 721 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 RGNQ15493 299 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 AGAP7PQ5VUJ5 663 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 FAM122CQ6P4D5 195 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 SPATC1Q76KD6 591 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 OR51G2Q8NGK0 314 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 C5AR2Q9P296 337 aa15.25■□□□□ 0.03
USP42-207ENST00000521713 TNFRSF10CO14798 259 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 VNN2O95498 520 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 CKMT1AP12532 417 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ACTA2P62736 377 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ACTG2P63267 376 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 TRIM61Q5EBN2 209 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 UBE2UQ5VVX9 321 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 C1orf94Q6P1W5 598 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GALNT11Q8NCW6 608 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ARL11Q969Q4 196 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ZNF436Q9C0F3 470 aaPredicted RBP15.24■□□□□ 0.03
USP42-207ENST00000521713 PISDQ9UG56 409 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 A0A1B0GUL6 1792 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 NME4O00746 187 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GJB3O75712 270 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 H2BFMP0C1H6 154 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 CLUP10909 449 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ALDH3B2P48448 385 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 HK3P52790 923 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GTF2IRD2BQ6EKJ0 949 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 LINC00299Q6ZSB3 139 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GTF2IRD2Q86UP8 949 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GPR137CQ8N3F9 429 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 BIN3Q9NQY0 253 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 AGPAT4Q9NRZ5 378 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ENPP4Q9Y6X5 453 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ZNF705EA8MWA4 302 aaPredicted RBP15.24■□□□□ 0.03
USP42-207ENST00000521713 NARSO43776 548 aaKnown RBP15.24■□□□□ 0.03
USP42-207ENST00000521713 SRFP11831 508 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 MC3RP41968 323 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 PRKXP51817 358 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 CEACAM19Q7Z692 300 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 OR2T35Q8NGX2 323 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ADAM29Q9UKF5 820 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 SLC22A31A6NKX4 558 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 SEC14L5O43304 696 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 PVRP15151 417 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 ZNF28P17035 718 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 CAPN3P20807 821 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 SLC5A2P31639 672 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GLP1RP43220 463 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 VEZF1Q14119 521 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 GK2Q14410 553 aaPredicted RBP15.24■□□□□ 0.03
USP42-207ENST00000521713 ZNF584Q8IVC4 421 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 UBALD2Q8IYN6 164 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 RHOXF1Q8NHV9 184 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 THAP4Q8WY91 577 aa15.24■□□□□ 0.03
USP42-207ENST00000521713 CNOT9Q92600 299 aaKnown RBP15.24■□□□□ 0.03
USP42-207ENST00000521713 TOXO94900 526 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 IFNA17P01571 189 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 RPL35P42766 123 aaKnown RBP15.23■□□□□ 0.03
USP42-207ENST00000521713 MS4A2Q01362 244 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 Q6ZNX1 250 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 OR9A2Q8NGT5 310 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 TBC1D20Q96BZ9 403 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 MRI1Q9BV20 369 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 ACPTQ9BZG2 426 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 RIMS3Q9UJD0 308 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 TCRBV3S1A0A5B6 114 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 FMO6PO60774 539 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SCGB1D2O95969 90 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 PTNP21246 168 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 ATXN7L3Q14CW9 347 aaPredicted RBP15.23■□□□□ 0.03
USP42-207ENST00000521713 CCDC120Q96HB5 630 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 CUTCQ9NTM9 273 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 TTLL8A6PVC2 850 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 PRKCAP17252 672 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 RIN1Q13671 783 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SNAPC3Q92966 411 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SNX18Q96RF0 628 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SECISBP2Q96T21 854 aaKnown RBP15.23■□□□□ 0.03
USP42-207ENST00000521713 A0A1W2PQL4 384 aaPredicted RBP15.23■□□□□ 0.03
USP42-207ENST00000521713 MEIOCA2RUB1 952 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SC5DO75845 299 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 GPR75O95800 540 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 TFAP2AP05549 437 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 SNRPD2P62316 118 aaKnown RBP15.23■□□□□ 0.03
USP42-207ENST00000521713 MFSD9Q8NBP5 474 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 NDNFQ8TB73 568 aa15.23■□□□□ 0.03
USP42-207ENST00000521713 CASTOR1Q8WTX7 329 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms