RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 TMCO1Q9UM00 188 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 NPIPA1Q9UND3 350 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 MRPS33Q9Y291 106 aaKnown RBP4.18□□□□□ -1.74
NUP54-206ENST00000508465 MMACHCQ9Y4U1 282 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SPACA6W5XKT8 324 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 SHANK1Q9Y566 2161 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 ESPL1Q14674 2120 aa4.18□□□□□ -1.74
NUP54-206ENST00000508465 DCHS2Q6V1P9 2916 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 A0A0G2JMM0 328 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 A0A1W2PPB8 328 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 A0A1W2PRS3 328 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CLEC18AA5D8T8 446 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 PINLYPA6NC86 204 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 FAM90A10PA6NDY2 464 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 KIR3DP1A8MWS1 328 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 COPEO14579 308 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ZNF500O60304 480 aaPredicted RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 PLIN3O60664 434 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 UGDHO60701 494 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ERAL1O75616 437 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 SLC25A12O75746 678 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 LRATO95237 230 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 AIFM1O95831 613 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 GSTA1P08263 222 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CYC1P08574 325 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 RPS17P08708 135 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 CD53P19397 219 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 TNFRSF8P28908 595 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 SERPINB1P30740 379 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 FEN1P39748 380 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 SOX3P41225 446 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 STT3AP46977 705 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CCT5P48643 541 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CYB561P49447 251 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 SSR4P51571 173 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CLCN2P51788 898 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 XKP51811 444 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 MAPK12P53778 367 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 FOXA1P55317 472 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ERVK-8P63133 956 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 RAE1P78406 368 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 PHEXP78562 749 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 HSF1Q00613 529 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 TNFRSF17Q02223 184 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 IFFO1Q0D2I5 559 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 GALNT1Q10472 559 aaPredicted RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 TBL3Q12788 808 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 ASPHQ12797 758 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 SERTAD2Q14140 314 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 RCN2Q14257 317 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 GALEQ14376 348 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 HABP2Q14520 560 aaPredicted RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 PIGGQ5H8A4 983 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CFAP157Q5JU67 520 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 NDUFAF5Q5TEU4 345 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ZNF324BQ6AW86 544 aaPredicted RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 CLEC6AQ6EIG7 209 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 RPUSD3Q6P087 351 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 METTL2BQ6P1Q9 378 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 CLEC18BQ6UXF7 455 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 GFRALQ6UXV0 394 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ZYG11AQ6WRX3 759 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 C3P1Q6ZMU1 363 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 MEPCEQ7L2J0 689 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 COMMD6Q7Z4G1 85 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 TDRPQ86YL5 185 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 C10orf107Q8IVU9 208 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 METTL4Q8N3J2 472 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 TMEM156Q8N614 296 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CPSF7Q8N684 471 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 C1orf52Q8N6N3 182 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 EIF1ADQ8N9N8 165 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 CLEC18CQ8NCF0 446 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ZBTB34Q8NCN2 500 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 MORN4Q8NDC4 146 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 OR4K14Q8NGD5 310 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 SLC2A12Q8TD20 617 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ACMSDQ8TDX5 336 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ZNF721Q8TF20 911 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 AENQ8WTP8 325 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 NR4A3Q92570 626 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 DAZLQ92904 295 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 RIT1Q92963 219 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 TM4SF18Q96CE8 201 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 VMP1Q96GC9 406 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 CLPTM1LQ96KA5 538 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 DGAT2Q96PD7 388 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ZNF382Q96SR6 550 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 MECRQ9BV79 373 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 DEFB127Q9H1M4 99 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ANKRA2Q9H9E1 313 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 MID1IP1Q9NPA3 183 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 RLIMQ9NVW2 624 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 LYARQ9NX58 379 aaKnown RBP4.17□□□□□ -1.74
NUP54-206ENST00000508465 ETAA1Q9NY74 926 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 PSD3Q9NYI0 1048 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 AHSPQ9NZD4 102 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 ABI3Q9P2A4 366 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 SLC17A7Q9P2U7 560 aa4.17□□□□□ -1.74
NUP54-206ENST00000508465 VPS29Q9UBQ0 182 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms