RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 NHSL2Q5HYW2 709 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 C1orf185Q5T7R7 199 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 RAET1LQ5VY80 246 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 TNFAIP8L2Q6P589 184 aaPredicted RBP14.48□□□□□ -0.09
LIME1-209ENST00000494776 ENPP6Q6UWR7 440 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 APOOLQ6UXV4 268 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 RPRMLQ8N4K4 120 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 ZNF614Q8N883 585 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 FADS6Q8N9I5 356 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 MIPOL1Q8TD10 442 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 SDCCAG3Q96C92 435 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 NEURL3Q96EH8 262 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 ITCHQ96J02 903 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 SERHL2Q9H4I8 314 aa14.48□□□□□ -0.09
LIME1-209ENST00000494776 MRPS18CQ9Y3D5 142 aaKnown RBP14.48□□□□□ -0.09
LIME1-209ENST00000494776 ZNF407Q9C0G0 2248 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 MYO7BQ6PIF6 2116 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 NPIPA5A0A0B4J1W7 369 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 A0A0G2JND7 137 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 AHRRA9YTQ3 701 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 NPIPA7E9PJI5 369 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 H3BNH8 94 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 NPIPA8P0DM63 369 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 NCF2P19878 526 aaPredicted RBP14.47□□□□□ -0.09
LIME1-209ENST00000494776 AGAP20933 346 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 PTGER4P35408 488 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 SRYQ05066 204 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 GPR68Q15743 365 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 ARHGAP11BQ3KRB8 267 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 C6orf10Q5SRN2 563 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 DNAJC14Q6Y2X3 702 aaPredicted RBP14.47□□□□□ -0.09
LIME1-209ENST00000494776 MSANTD1Q6ZTZ1 278 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 RNF130Q86XS8 419 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 MISPQ8IVT2 679 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 ULK2Q8IYT8 1036 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 MARVELD2Q8N4S9 558 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 CHDHQ8NE62 594 aaPredicted RBP14.47□□□□□ -0.09
LIME1-209ENST00000494776 RFWD2Q8NHY2 731 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 PHOSPHO1Q8TCT1 267 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 CA5BP1Q8WTZ4 195 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 RAB8BQ92930 207 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 VPS33AQ96AX1 596 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 SDF2Q99470 211 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 SIKE1Q9BRV8 207 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 TRIM33Q9UPN9 1127 aa14.47□□□□□ -0.09
LIME1-209ENST00000494776 A0A1W2PQD3 144 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 FAM47E-STBD1D6RA91 191 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 PRSS44E7EML9 344 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 GTPBP1O00178 669 aaKnown RBP14.46□□□□□ -0.09
LIME1-209ENST00000494776 ZIC3O60481 467 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 STX11O75558 287 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 KRT75O95678 551 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 VIMP08670 466 aaKnown RBP14.46□□□□□ -0.09
LIME1-209ENST00000494776 TROVE2P10155 538 aaKnown RBP eCLIP14.46□□□□□ -0.09
LIME1-209ENST00000494776 MSX1P28360 303 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 ATP12AP54707 1039 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 NUP107P57740 925 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 IRX1P78414 480 aaPredicted RBP14.46□□□□□ -0.09
LIME1-209ENST00000494776 HPCAP84074 193 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 ART3Q13508 389 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 SQLEQ14534 574 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 GPAT3Q53EU6 434 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 DCST1Q5T197 706 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 PNPT1Q8TCS8 783 aaKnown RBP14.46□□□□□ -0.09
LIME1-209ENST00000494776 ASB5Q8WWX0 329 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 C1GALT1C1Q96EU7 318 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 WDYHV1Q96HA8 205 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 SH3YL1Q96HL8 342 aaPredicted RBP14.46□□□□□ -0.09
LIME1-209ENST00000494776 TTYH2Q9BSA4 534 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 PRDM14Q9GZV8 571 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 RABEP2Q9H5N1 569 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 CCDC167Q9P0B6 97 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 FAM215AQ9Y5M1 114 aa14.46□□□□□ -0.09
LIME1-209ENST00000494776 NUP214P35658 2090 aaPredicted RBP14.46□□□□□ -0.09
LIME1-209ENST00000494776 DNAJC13O75165 2243 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 IGLV3-32A0A0A0MS00 114 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 B4DXG7 233 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 H0Y3Z8 333 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 NR5A2O00482 541 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 HCRTR2O43614 444 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 CLDN14O95500 239 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 GLI4P10075 376 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 CHMP24386 653 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 ZFP36L2P47974 494 aaKnown RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 MRPL19P49406 292 aaKnown RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 STARP49675 285 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 RNF144AP50876 292 aaPredicted RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 ATP4BP51164 291 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 GFRA1P56159 465 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 TXNL4AP83876 142 aaKnown RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 GUCY1A3Q02108 690 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 RCAN2Q14206 197 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 ZNF630Q2M218 657 aaPredicted RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 AGKQ53H12 422 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 RTL6Q6ICC9 239 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 MTERF4Q7Z6M4 381 aaKnown RBP14.45□□□□□ -0.1
LIME1-209ENST00000494776 B4GALNT2Q8NHY0 566 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 TRIB1Q96RU8 372 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 PIGQQ9BRB3 760 aa14.45□□□□□ -0.1
LIME1-209ENST00000494776 MKLN1Q9UL63 735 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms