RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 PRKAG1P54619 331 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CASP9P55211 416 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 MTPNP58546 118 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 MRPS35P82673 323 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 LRRC74AQ0VAA2 488 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 BIKQ13323 160 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 GAB1Q13480 694 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SERTAD2Q14140 314 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 EXOSC7Q15024 291 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 NSDHLQ15738 373 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SPDYE7PQ495Y7 208 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TRMT12Q53H54 448 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 FHL5Q5TD97 284 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TMEM107Q6UX40 140 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 C16orf89Q6UX73 402 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 QSOX2Q6ZRP7 698 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 LANCL3Q6ZV70 420 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ASRGL1Q7L266 308 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 C6orf120Q7Z4R8 191 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SAMD14Q8IZD0 417 aaPredicted RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ST13P4Q8IZP2 240 aaPredicted RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 PGAM4Q8N0Y7 254 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 OR7G2Q8NG99 324 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 OR5AK3PQ8NH89 298 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 PSMA8Q8TAA3 256 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 PNPT1Q8TCS8 783 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ZFP90Q8TF47 636 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TMEM125Q96AQ2 219 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 FKBP10Q96AY3 582 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ELP4Q96EB1 424 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 RBM18Q96H35 190 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ANKRD27Q96NW4 1050 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 DGAT2Q96PD7 388 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 HOPXQ9BPY8 73 aaPredicted RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 THTPAQ9BU02 230 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CRB3Q9BUF7 120 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 THUMPD3Q9BV44 507 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 B3GNT4Q9C0J1 378 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 C1orf21Q9H246 121 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 LRMDAQ9H2I8 198 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 IKZF5Q9H5V7 419 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 CXorf21Q9HAI6 301 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ASCL3Q9NQ33 180 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 FBXO34Q9NWN3 711 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 ADA2Q9NZK5 511 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 MAT2BQ9NZL9 334 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 TMEM181Q9P2C4 612 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 C3orf18Q9UK00 162 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 USP22Q9UPT9 525 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 FARSAQ9Y285 508 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 PTRH2Q9Y3E5 179 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SNX8Q9Y5X2 465 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.08□□□□□ -1.44
TRA2B-216ENST00000493864 IGSF10Q6WRI0 2623 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 PTPRQQ9UMZ3 2332 aa6.08□□□□□ -1.44
TRA2B-216ENST00000493864 MGAQ8IWI9 3026 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 FAM208BQ5VWN6 2430 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 IGHV3-20A0A0C4DH32 117 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 RNF103-CHMP3A0A140T963 221 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 LOC101059948A0A1B0GTJ6 334 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 EVPLLA8MZ36 301 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 H3BML4 177 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 UPK1AO00322 258 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 PLOD2O00469 737 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 NME4O00746 187 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 EMC8O43402 210 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 RAD1O60671 282 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 ALOX12BO75342 701 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 SORBS2O94875 1100 aaKnown RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 ATP1B1P05026 303 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 UMODP07911 640 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 RAB40ALP0C0E4 278 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 APOBEC3AP31941 199 aaPredicted RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 CHI3L1P36222 383 aaPredicted RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 CHN2P52757 468 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 OR4D2P58180 307 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 RPS18P62269 152 aaKnown RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 KCNJ2P63252 427 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 NHLH2Q02577 135 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 LIPEQ05469 1076 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 TP53BP2Q13625 1128 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 CEACAM7Q14002 265 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 NCF4Q15080 339 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 CDSNQ15517 529 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 TGIF1Q15583 401 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 PRICKLE4Q2TBC4 344 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 FLYWCH1Q4VC44 716 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 SFT2D3Q587I9 215 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 ZNF628Q5EBL2 1059 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 SAXO2Q658L1 398 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 ANKRD37Q7Z713 158 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 C10orf111Q8N326 155 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 ESX1Q8N693 406 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 RNF148Q8N7C7 305 aa6.07□□□□□ -1.44
TRA2B-216ENST00000493864 ENDOVQ8N8Q3 282 aaKnown RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 NLGN4YQ8NFZ3 816 aaPredicted RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 PTPMT1Q8WUK0 201 aaPredicted RBP6.07□□□□□ -1.44
TRA2B-216ENST00000493864 EXTL1Q92935 676 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms