RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 RABL3Q5HYI8 236 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 TNFAIP8L2Q6P589 184 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 RNF130Q86XS8 419 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 OR2L13Q8N349 312 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 B3GNT7Q8NFL0 401 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 OR52N2Q8NGI0 321 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 FBXO30Q8TB52 745 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 NCLNQ969V3 563 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CTHRC1Q96CG8 243 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 SLC7A6OSQ96CW6 309 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 VMP1Q96GC9 406 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 ECSITQ9BQ95 431 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 GPATCH1Q9BRR8 931 aaKnown RBP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 YIPF4Q9BSR8 244 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 THTPAQ9BU02 230 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 OR10A5Q9H207 317 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 LRMDAQ9H2I8 198 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 NANOGQ9H9S0 305 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 SEC14L3Q9UDX4 400 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 C19orf53Q9UNZ5 99 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 ERVK-11Q9UQG0 969 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 CFL2Q9Y281 166 aa11.18□□□□□ -0.62
UPF3A-210ENST00000493727 KLF2Q9Y5W3 355 aaPredicted RBP11.18□□□□□ -0.62
UPF3A-210ENST00000493727 DNAJC8O75937 253 aaPredicted RBP11.17□□□□□ -0.62
UPF3A-210ENST00000493727 HMGN2P05204 90 aaKnown RBP11.17□□□□□ -0.62
UPF3A-210ENST00000493727 CELA2AP08217 269 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 HOXB9P17482 250 aaPredicted RBP11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SLC6A2P23975 617 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SLC26A5P58743 744 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 FUT7Q11130 342 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF766Q5HY98 468 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SAMD4BQ5PRF9 694 aaKnown RBP11.17□□□□□ -0.62
UPF3A-210ENST00000493727 GCNT6Q5T4J0 391 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 HLA-DQA1Q5Y7H0 255 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 MFSD12Q6NUT3 480 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 H3F3CQ6NXT2 135 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 RPTNQ6XPR3 784 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SLC29A4Q7RTT9 530 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 LGI4Q8N135 537 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ARHGAP24Q8N264 748 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 KIF2BQ8N4N8 673 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SLC5A8Q8N695 610 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 HORMAD2Q8N7B1 307 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF321PQ8N8H1 164 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 GOLM1Q8NBJ4 401 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 M1APQ8TC57 530 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF721Q8TF20 911 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ITLN2Q8WWU7 325 aaPredicted RBP11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SLC9A6Q92581 669 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 TMEM125Q96AQ2 219 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 GAL3ST4Q96RP7 486 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 CDRT15Q96T59 188 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ACTRT3Q9BYD9 372 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 PIF1Q9H611 641 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 FOLH1BQ9HBA9 442 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF639Q9UID6 485 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 PRPF19Q9UMS4 504 aaKnown RBP11.17□□□□□ -0.62
UPF3A-210ENST00000493727 DNHD1Q96M86 4753 aa11.17□□□□□ -0.62
UPF3A-210ENST00000493727 SPG11Q96JI7 2443 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 TRGV8A0A0C4DH27 118 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 TRBV11-1A0A0K0K1C0 115 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 TMEM247A6NEH6 219 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 OR6C76A6NM76 312 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 A8MUI8 341 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 DNAJA2O60884 412 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 NME6O75414 186 aaPredicted RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 F10P00742 488 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ALOX5P09917 674 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ETFAP13804 333 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 PTGER4P35408 488 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 PGM1P36871 562 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 CA7P43166 264 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 CLCN2P51788 898 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 DSTNP60981 165 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 TXNL4AP83876 142 aaKnown RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 LIPEQ05469 1076 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 FADDQ13158 208 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ATAD3BQ5T9A4 648 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 C8orf82Q6P1X6 216 aaPredicted RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 HSDL2Q6YN16 418 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 GDF7Q7Z4P5 450 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 IFNEQ86WN2 208 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ZNF808Q8N4W9 903 aaPredicted RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 CDRT4Q8N9R6 151 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 TMEM178AQ8NBL3 297 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 FAM98AQ8NCA5 519 aaKnown RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 SIMC1Q8NDZ2 872 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 OR10A6Q8NH74 314 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 C16orf52Q8NHV5 167 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 ADAMTS15Q8TE58 950 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 OTUB1Q96FW1 271 aaPredicted RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 C16orf58Q96GQ5 468 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 LURAP1Q96LR2 239 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 KCTD14Q9BQ13 255 aaPredicted RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 UTP23Q9BRU9 249 aaKnown RBP11.16□□□□□ -0.62
UPF3A-210ENST00000493727 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
UPF3A-210ENST00000493727 IKZF5Q9H5V7 419 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms