RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TMEM64Q6YI46 380 aa14.64□□□□□ -0.07
BRD9-208ENST00000489816 ZNF517Q6ZMY9 492 aaPredicted RBP14.64□□□□□ -0.07
BRD9-208ENST00000489816 BMFQ96LC9 184 aa14.64□□□□□ -0.07
BRD9-208ENST00000489816 KCNE5Q9UJ90 142 aa14.64□□□□□ -0.07
BRD9-208ENST00000489816 ZNF232Q9UNY5 417 aa14.64□□□□□ -0.07
BRD9-208ENST00000489816 A0A075B6Q4 140 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 GXYLT2A0PJZ3 443 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 CASC3O15234 703 aaKnown RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 PLRG1O43660 514 aaKnown RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 DYRK3O43781 588 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 FGF17O60258 216 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SERPINI2O75830 405 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 IFI30P13284 250 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 LAMP2P13473 410 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 LSSP48449 732 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SLC9A3P48764 834 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 HCCSP53701 268 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 MRPL2Q5T653 305 aaKnown RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 SDE2Q6IQ49 451 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 PAQR7Q86WK9 346 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 PEX5LQ8IYB4 626 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SRFBP1Q8NEF9 429 aaKnown RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 ACOT11Q8WXI4 607 aaPredicted RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 FAM3CQ92520 227 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 DNAJA3Q96EY1 480 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 PTCHD1Q96NR3 888 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SDF2Q99470 211 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 RAB11FIP5Q9BXF6 653 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 C11orf54Q9H0W9 315 aaPredicted RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 CCDC86Q9H6F5 360 aaKnown RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 CSF3P09919 207 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 UGT2B7P16662 529 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 GSTM3P21266 225 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 TBXA2RP21731 343 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 ERV3-1Q14264 604 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 NDUFA9Q16795 377 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 AGAP6Q5VW22 663 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 PAMR1Q6UXH9 720 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 RPTNQ6XPR3 784 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 NEIL3Q8TAT5 605 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 FGF11Q92914 225 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 AGAP4Q96P64 663 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 NUFIP1Q9UHK0 495 aaKnown RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 LIPT1Q9Y234 373 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 C12orf71A8MTZ7 269 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SGK494L7N484 410 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SURF4O15260 269 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 CT62P0C5K7 136 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 MAKP20794 623 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 GABRA3P34903 492 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 IFNGR2P38484 337 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 ABATP80404 500 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 RAB40BQ12829 278 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 PLK5Q496M5 336 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 GXYLT1Q4G148 440 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 FIGLAQ6QHK4 219 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 OR10H4Q8NGA5 316 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 OR2A5Q96R48 311 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 PITHD1Q9GZP4 211 aaPredicted RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 NKX2-4Q9H2Z4 354 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 UBQLN3Q9H347 655 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 KCMF1Q9P0J7 381 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 SIRT4Q9Y6E7 314 aaPredicted RBP14.63□□□□□ -0.07
BRD9-208ENST00000489816 WDFY3Q8IZQ1 3526 aa14.63□□□□□ -0.07
BRD9-208ENST00000489816 MUC22E2RYF6 1773 aaPredicted RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 ASXL3Q9C0F0 2248 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 CPMP14384 443 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 HTR2AP28223 471 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 HTR3AP46098 478 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 CD83Q01151 205 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 IL18Q14116 193 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 RNASE12Q5GAN4 147 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 THSD4Q6ZMP0 1018 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 COX18Q8N8Q8 333 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 OR4N2Q8NGD1 307 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 OR13C2Q8NGS9 318 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 FYTTD1Q96QD9 318 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 HOXD1Q9GZZ0 328 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 OR52D1Q9H346 318 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 KIR3DX1Q9H7L2 352 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 SF3B6Q9Y3B4 125 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 LRRN3E7EW58 273 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 H0YGG7 62 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 NOS3P29474 1203 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 CTBP2P56545 445 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 VSX2P58304 361 aaPredicted RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 ARF3P61204 181 aaPredicted RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 RACK1P63244 317 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 MRPS15P82914 257 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 MINDY4Q4G0A6 757 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 C3orf38Q5JPI3 329 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 DDI2Q5TDH0 399 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 CNIH2Q6PI25 160 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 RASSF6Q6ZTQ3 369 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 SYT9Q86SS6 491 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 METTL27Q8N6F8 245 aaPredicted RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 ARHGDIGQ99819 225 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 LRRN3Q9H3W5 708 aa14.62□□□□□ -0.07
BRD9-208ENST00000489816 CACYBPQ9HB71 228 aaKnown RBP14.62□□□□□ -0.07
BRD9-208ENST00000489816 OR6C2Q9NZP2 312 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms