RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 A0A0U1RQV5 110 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 RGSL1A5PLK6 1076 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 OR6C65A6NJZ3 312 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 B4DXG7 233 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 TPST2O60704 377 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 TBL1XO60907 577 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 NOL4O94818 638 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 OR4F21O95013 312 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 HEXBP07686 556 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 HBQ1P09105 142 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 PDHBP11177 359 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 NCF1P14598 390 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 CALB2P22676 271 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 CYLC1P35663 651 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 RGRP47804 291 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 POU3F4P49335 361 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 MEOX2P50222 304 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 EFNA3P52797 238 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 POLR2FP61218 127 aaKnown RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 OC90Q02509 493 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 ATXN7L3Q14CW9 347 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 KIAA0040Q15053 153 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 TATDN3Q17R31 274 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 CCDC57Q2TAC2 916 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 PAN3Q58A45 887 aaKnown RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 PAMR1Q6UXH9 720 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 MOB1BQ7L9L4 216 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 APTXQ7Z2E3 356 aaKnown RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 MRAPQ8TCY5 172 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 TRUB1Q8WWH5 349 aaKnown RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 B3GALT6Q96L58 329 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 DUSP16Q9BY84 665 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 DEFB126Q9BYW3 111 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 POLR3FQ9H1D9 316 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 DHX33Q9H6R0 707 aaKnown RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 EPS15L1Q9UBC2 864 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 SAMD4AQ9UPU9 718 aaKnown RBP2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 MFHAS1Q9Y4C4 1052 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 ZNF318Q5VUA4 2279 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 CUX2O14529 1486 aa2.82□□□□□ -1.96
HMGB1P36-201ENST00000487709 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 FRG2CA6NGY1 282 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 FAM74A7A6NL05 159 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 WWP2O00308 870 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 NDC80O14777 642 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 CHADO15335 359 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 DUX1O43812 170 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 DIRAS3O95661 229 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 IFNB1P01574 187 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 KLK2P20151 261 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 SERPINA2P20848 420 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 NTSP30990 170 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 CDH5P33151 784 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 MDH1P40925 334 aaKnown RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 NOVA1P51513 510 aaKnown RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 KRTAP10-1P60331 282 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 IGLV3-21P80748 117 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 OTUD4Q01804 1114 aaKnown RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 KCNJ11Q14654 390 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 MAPK6Q16659 721 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 FAM74A3Q4VXF1 159 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 FHL5Q5TD97 284 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 BLOC1S2Q6QNY1 142 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 ERASQ7Z444 233 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 FADS6Q8N9I5 356 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 OR9A1PQ8NGU1 263 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 THRSPQ92748 146 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 SYAP1Q96A49 352 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 CNOT6LQ96LI5 555 aaKnown RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 RANBP9Q96S59 729 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 CNPY3Q9BT09 278 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 TM2D1Q9BX74 207 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 CCSER1Q9C0I3 900 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 GPN2Q9H9Y4 310 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 AGPAT5Q9NUQ2 364 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 CLEC4EQ9ULY5 219 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 DUSP12Q9UNI6 340 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 B9D1Q9UPM9 204 aa2.81□□□□□ -1.96
HMGB1P36-201ENST00000487709 KIF16BQ96L93 1317 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 A0A1B0GUL7 405 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 FAM220BPB1ANY3 271 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 NUDT21O43809 227 aaKnown RBP2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 UGT2B17O75795 530 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 SERF1AO75920 110 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 LY6G6DO95868 133 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 STSP08842 583 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 CCDC166P0CW27 439 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 EPB41P11171 864 aaKnown RBP2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 PSMB1P20618 241 aaKnown RBP2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 ZP3P21754 424 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 CD86P42081 329 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 VLDLRP98155 873 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 CSTF1Q05048 431 aaKnown RBP2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 SLC10A7Q0GE19 358 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 MESDQ14696 234 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 RFTN1Q14699 578 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 ISXQ2M1V0 245 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 CGB2Q6NT52 195 aa2.8□□□□□ -1.96
HMGB1P36-201ENST00000487709 ZCCHC12Q6PEW1 402 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms