RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 OR1D4P47884 311 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 PEX6Q13608 980 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 ANKDD1AQ495B1 522 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 TCTEX1D4Q5JR98 221 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 ATAD3BQ5T9A4 648 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 RNLSQ5VYX0 342 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 OLFML2AQ68BL7 652 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 CCBE1Q6UXH8 406 aaPredicted RBP3.52□□□□□ -1.85
SMC4-218ENST00000486711 GCNT7Q6ZNI0 430 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 Q8N9G6 341 aaPredicted RBP3.52□□□□□ -1.85
SMC4-218ENST00000486711 CNIH3Q8TBE1 160 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 RAET1EQ8TD07 263 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 TTC25Q96NG3 672 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 TMEM121Q9BTD3 319 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 ALG12Q9BV10 488 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 RAB33BQ9H082 229 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 TMEM117Q9H0C3 514 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 GLT8D2Q9H1C3 349 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 RMND5AQ9H871 391 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 DPM3Q9P2X0 92 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 SLC2A6Q9UGQ3 507 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 ANAPC7Q9UJX3 599 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 MRPS7Q9Y2R9 242 aaKnown RBP3.52□□□□□ -1.85
SMC4-218ENST00000486711 MAD1L1Q9Y6D9 718 aa3.52□□□□□ -1.85
SMC4-218ENST00000486711 OR6C65A6NJZ3 312 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SRRM5B3KS81 715 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 XPO1O14980 1071 aaKnown RBP3.51□□□□□ -1.85
SMC4-218ENST00000486711 STX7O15400 261 aaKnown RBP3.51□□□□□ -1.85
SMC4-218ENST00000486711 ZNF354AO60765 605 aaPredicted RBP3.51□□□□□ -1.85
SMC4-218ENST00000486711 SRSF10O75494 262 aaKnown RBP3.51□□□□□ -1.85
SMC4-218ENST00000486711 RHOBTB1O94844 696 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 KIAA0754O94854 1291 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 UFL1O94874 794 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SLC2A10O95528 541 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 OPN1LWP04000 364 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 UMPSP11172 480 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 PDHBP11177 359 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 XRCC1P18887 633 aaPredicted RBP3.51□□□□□ -1.85
SMC4-218ENST00000486711 OTX2P32243 289 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 NF2P35240 595 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 XCR1P46094 333 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 RND3P61587 244 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 PAX2Q02962 417 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SERTAD2Q14140 314 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 TIMM50Q3ZCQ8 353 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 C2orf66Q6UXQ4 117 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 STAC2Q6ZMT1 411 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 CYS1Q717R9 158 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 NAXDQ8IW45 347 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SLC39A11Q8N1S5 342 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 DENND6BQ8NEG7 585 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 NANPQ8TBE9 248 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SPRYD4Q8WW59 207 aaPredicted RBP3.51□□□□□ -1.85
SMC4-218ENST00000486711 SENP8Q96LD8 212 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 CASD1Q96PB1 797 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 TXN2Q99757 166 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 ERP44Q9BS26 406 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 RHOJQ9H4E5 214 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SMC3Q9UQE7 1217 aa3.51□□□□□ -1.85
SMC4-218ENST00000486711 SLC17A2O00624 439 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 MAGEB3O15480 346 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 TPST2O60704 377 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 BCAS1O75363 584 aaPredicted RBP3.5□□□□□ -1.85
SMC4-218ENST00000486711 ADCY5O95622 1261 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 UGT2B4P06133 528 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 BCL3P20749 454 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 GATA2P23769 480 aaPredicted RBP3.5□□□□□ -1.85
SMC4-218ENST00000486711 PTBP1P26599 531 aaKnown RBP eCLIP3.5□□□□□ -1.85
SMC4-218ENST00000486711 SLC25A1P53007 311 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 CD47Q08722 323 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 PJVKQ0ZLH3 352 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 TGIF1Q15583 401 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 Q1RN00 199 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 RABGAP1LQ5R372 815 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 MARC1Q5VT66 337 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 CES3Q6UWW8 571 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 APTXQ7Z2E3 356 aaKnown RBP3.5□□□□□ -1.85
SMC4-218ENST00000486711 CDC20BQ86Y33 519 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 CADM2Q8N3J6 435 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 CSNK1A1LQ8N752 337 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 IPMKQ8NFU5 416 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 OR2T34Q8NGX1 318 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 TRUB1Q8WWH5 349 aaKnown RBP3.5□□□□□ -1.85
SMC4-218ENST00000486711 CTNNBL1Q8WYA6 563 aaPredicted RBP3.5□□□□□ -1.85
SMC4-218ENST00000486711 TMEM80Q96HE8 168 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 FOXN4Q96NZ1 517 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 TM2D1Q9BX74 207 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 DUSP16Q9BY84 665 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 CRNKL1Q9BZJ0 848 aaKnown RBP3.5□□□□□ -1.85
SMC4-218ENST00000486711 AIPL1Q9NZN9 384 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 TP53TG3Q9ULZ0 132 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 GSTK1Q9Y2Q3 226 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 WDR45Q9Y484 360 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 METP08581 1390 aa3.5□□□□□ -1.85
SMC4-218ENST00000486711 SAGE2PA6NJ88 616 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 E9PLD3 99 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 K7EQM0 130 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 ZSCAN12O43309 604 aa3.49□□□□□ -1.85
SMC4-218ENST00000486711 OR1F1O43749 312 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms