RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 C2orf73Q8N5S3 287 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-209ENST00000486618 HORMAD2Q8N7B1 307 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 NHLRC2Q8NBF2 726 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 C5orf30Q96GV9 206 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 APOL2Q9BQE5 337 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 MESP1Q9BRJ9 268 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 UTP23Q9BRU9 249 aaKnown RBP6.29□□□□□ -1.4
HDAC3-209ENST00000486618 CHID1Q9BWS9 393 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 TSSK1BQ9BXA7 367 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 RAB11FIP5Q9BXF6 653 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 C1QTNF3Q9BXJ4 246 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 RAB17Q9H0T7 212 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 GBA3Q9H227 469 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 CXXC4Q9H2H0 198 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 MS4A5Q9H3V2 200 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 METTL7AQ9H8H3 244 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 SMURF1Q9HCE7 757 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 MKKSQ9NPJ1 570 aaPredicted RBP6.29□□□□□ -1.4
HDAC3-209ENST00000486618 CHRAC1Q9NRG0 131 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 THAP1Q9NVV9 213 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 DNAJB11Q9UBS4 358 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 KCNN3Q9UGI6 736 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 MTO1Q9Y2Z2 717 aaKnown RBP6.29□□□□□ -1.4
HDAC3-209ENST00000486618 RTTNQ86VV8 2226 aa6.29□□□□□ -1.4
HDAC3-209ENST00000486618 JMJD1CQ15652 2540 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 A0A0J9YVX5 310 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ASPDHA6ND91 283 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 TMEM200CA6NKL6 621 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CLCA1A8K7I4 914 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 H3BUI4 141 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 H7C0C1 242 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CCL22O00626 93 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CTDSP2O14595 271 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 GPR171O14626 319 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 AIM2O14862 343 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CTSVO60911 334 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 WISP2O76076 250 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ZWINTO95229 277 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 NSA2O95478 260 aaKnown RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CELA2AP08217 269 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 RPS17P08708 135 aaKnown RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ANXA5P08758 320 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ABHD2P08910 425 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ZNF888P0CJ79 500 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 C8orf89P0DMQ9 161 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 AREGP15514 252 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 IGFBP2P18065 325 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 EPORP19235 508 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 MYF6P23409 242 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CDKN2BP42772 138 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CRATP43155 626 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 PIK3CGP48736 1102 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 SLC9A3P48764 834 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 RAP1GDS1P52306 607 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 RAB4BP61018 213 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 NR1I3Q14994 352 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 MEP1AQ16819 746 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 SPATS1Q496A3 300 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 PLA1AQ53H76 456 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ACER2Q5QJU3 275 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 MBNL2Q5VZF2 373 aaKnown RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 TMEM205Q6UW68 189 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CLEC9AQ6UXN8 241 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 SYT10Q6XYQ8 523 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 SLC22A15Q8IZD6 547 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 BATF2Q8N1L9 274 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 LMNTD1Q8N9Z9 388 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 LINC01555Q8NAE3 123 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 OR8J2Q8NGG1 315 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 OR10Z1Q8NGY1 313 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 ZCCHC10Q8TBK6 192 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 KAT2AQ92830 837 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 HAUS1Q96CS2 278 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 LRRC46Q96FV0 321 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CDKN2AIPNLQ96HQ2 116 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 DNAJC1Q96KC8 554 aaKnown RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 IMMP1LQ96LU5 166 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 QKIQ96PU8 341 aaKnown RBP eCLIP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 TBL1YQ9BQ87 522 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 BPIFA3Q9BQP9 254 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 TMEM121Q9BTD3 319 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 BDH2Q9BUT1 245 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 NDEL1Q9GZM8 345 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 METTL8Q9H825 291 aaKnown RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 KCNJ16Q9NPI9 418 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 KLHL1Q9NR64 748 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 SACM1LQ9NTJ5 587 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 NLE1Q9NVX2 485 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 C19orf25Q9UFG5 118 aaPredicted RBP6.28□□□□□ -1.4
HDAC3-209ENST00000486618 NENFQ9UMX5 172 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 IFT52Q9Y366 437 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 EMC9Q9Y3B6 208 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 KLK4Q9Y5K2 254 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 KCNE2Q9Y6J6 123 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 FBN3Q75N90 2809 aa6.28□□□□□ -1.4
HDAC3-209ENST00000486618 CSPG4Q6UVK1 2322 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 FLNAP21333 2647 aaKnown RBP6.27□□□□□ -1.41
HDAC3-209ENST00000486618 LOC105369274A0A096LPK9 316 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 LOC102723532A0A0G2JNH3 316 aa6.27□□□□□ -1.41
HDAC3-209ENST00000486618 CFAP73A6NFT4 308 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms