RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 MLIPQ5VWP3 458 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 RAET1GQ6H3X3 334 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 ARSKQ6UWY0 536 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 LINC00696Q6ZRV3 163 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 DOLPP1Q86YN1 238 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 HIPK1Q86Z02 1210 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 TAGAPQ8N103 731 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 DEFB106AQ8N104 65 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 MOSPD2Q8NHP6 518 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 EXD1Q8NHP7 514 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 AGAP11Q8TF27 550 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 PTPMT1Q8WUK0 201 aaPredicted RBP3.99□□□□□ -1.77
VPS50-214ENST00000477935 SLC22A18Q96BI1 424 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 ECHDC3Q96DC8 303 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 GIMAP5Q96F15 307 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 PGAP3Q96FM1 320 aaPredicted RBP3.99□□□□□ -1.77
VPS50-214ENST00000477935 GPR137Q96N19 417 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 MAP3K3Q99759 626 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 GPATCH1Q9BRR8 931 aaKnown RBP3.99□□□□□ -1.77
VPS50-214ENST00000477935 FNDC11Q9BVV2 318 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 AP1M1Q9BXS5 423 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 TEX12Q9BXU0 123 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 MMP27Q9H306 513 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 ATP13A3Q9H7F0 1226 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 SLC40A1Q9NP59 571 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 FLRT3Q9NZU0 649 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 COX16Q9P0S2 106 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 VPS18Q9P253 973 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 CACNG5Q9UF02 275 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 MRPS28Q9Y2Q9 187 aaKnown RBP3.99□□□□□ -1.77
VPS50-214ENST00000477935 GRIP1Q9Y3R0 1128 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 PYGO1Q9Y3Y4 419 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 L3MBTL1Q9Y468 752 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 AP1M2Q9Y6Q5 423 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 CHD5Q8TDI0 1954 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 LRP4O75096 1905 aa3.99□□□□□ -1.77
VPS50-214ENST00000477935 PVALEFA0A1B0GWK0 134 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 A0A1W2PN81 502 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 A8MV72 311 aaPredicted RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 GPR89AB7ZAQ6 455 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 CLDN4O14493 209 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 GAPDHSO14556 408 aaPredicted RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 ATP6V0E1O15342 81 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 CALUO43852 315 aaPredicted RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 GOSR1O95249 250 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 TPOP07202 933 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 GPR89BP0CG08 455 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 ZNF30P17039 623 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 EFNA1P20827 205 aaPredicted RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 CHRNA7P36544 502 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 DCDP81605 110 aaKnown RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 P2RY6Q15077 328 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 PDLIM3Q53GG5 364 aaPredicted RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 TEX38Q6PEX7 206 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 DOK6Q6PKX4 331 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 TMEM270Q6UE05 265 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 ABRAXAS1Q6UWZ7 409 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 WASH2PQ6VEQ5 465 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 ENOSF1Q7L5Y1 443 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 SLC16A9Q7RTY1 509 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 CEP57L1Q8IYX8 460 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 OR13J1Q8NGT2 312 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 DTD2Q96FN9 168 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 PRAC1Q96KF2 57 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 BTBD10Q9BSF8 475 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 LMF2Q9BU23 707 aaKnown RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 UCK2Q9BZX2 261 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 EGLN1Q9GZT9 426 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 LAT2Q9GZY6 243 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 WDR13Q9H1Z4 485 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 MRM3Q9HC36 420 aaKnown RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 A4GALTQ9NPC4 353 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 FBXO2Q9UK22 296 aaPredicted RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 RPS6KA6Q9UK32 745 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 STAP1Q9ULZ2 295 aa3.98□□□□□ -1.77
VPS50-214ENST00000477935 WBP11Q9Y2W2 641 aaKnown RBP3.98□□□□□ -1.77
VPS50-214ENST00000477935 A0A1B0GU03 582 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 MEIOCA2RUB1 952 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 NKX2-6A6NCS4 301 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 USP27XA6NNY8 438 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 E7EQ34 232 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 H3BQV1 296 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 MED7O43513 233 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 TLX2O43763 284 aaPredicted RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 PRKRAO75569 313 aaKnown RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 SAT1P21673 171 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 YBEYP58557 167 aaPredicted RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 IFI35P80217 286 aaPredicted RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 BCL2L1Q07817 233 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 TAF13Q15543 124 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 C15orf59Q2T9L4 293 aaPredicted RBP3.97□□□□□ -1.77
VPS50-214ENST00000477935 CHRFAM7AQ494W8 412 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 MAPKAPK5-AS1Q8N8E1 139 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 ZNF485Q8NCK3 441 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 MCUQ8NE86 351 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 OR5M8Q8NGP6 311 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 SGMS2Q8NHU3 365 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 FGFBP3Q8TAT2 258 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 CCDC110Q8TBZ0 833 aa3.97□□□□□ -1.77
VPS50-214ENST00000477935 FAM222BQ8WU58 562 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms