RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 PIGFQ07326 219 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 FAM27E3Q08E93 113 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 MGAT2Q10469 447 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 SERTAD2Q14140 314 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF267Q14586 743 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 FASTKD3Q14CZ7 662 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 EFTUD2Q15029 972 aaKnown RBP eCLIP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 TGFBIQ15582 683 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 C4orf46Q504U0 113 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 SPANXN3Q5MJ09 141 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 FAM45BPQ6NSW5 357 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 TRIM40Q6P9F5 258 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 VWA1Q6PCB0 445 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CCDC137Q6PK04 289 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 PRSS57Q6UWY2 283 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 YTHDF3Q7Z739 585 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 LUZP2Q86TE4 346 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ZC3HC1Q86WB0 502 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 PRR22Q8IZ63 422 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 GCNT2Q8N0V5 402 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 LRRC75A-AS1Q8N1F1 130 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF615Q8N8J6 731 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 MAPK1IP1LQ8NDC0 245 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 FAM83FQ8NEG4 500 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 TOR1AIP2Q8NFQ8 470 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 OR5L2Q8NGL0 311 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 FAM45AQ8TCE6 357 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 SPPL2AQ8TCT8 520 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 SMPDL3BQ92485 455 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ADIPOR1Q96A54 375 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CTHRC1Q96CG8 243 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 PERPQ96FX8 193 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CFAP36Q96G28 342 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF597Q96LX8 424 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 RILPQ96NA2 401 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 DACH2Q96NX9 599 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 WFIKKN1Q96NZ8 548 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 TRIB1Q96RU8 372 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 PIP5K1AQ99755 562 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 DOHHQ9BU89 302 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 RBM24Q9BX46 236 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ANGPTL4Q9BY76 406 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 TRIM54Q9BYV2 358 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 OR51B5Q9H339 312 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 EHD1Q9H4M9 534 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 RPF2Q9H7B2 306 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CALHM2Q9HA72 323 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 NRIP3Q9NQ35 241 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 LZTFL1Q9NQ48 299 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CNIH4Q9P003 139 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CLCF1Q9UBD9 225 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 HEY2Q9UBP5 337 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 PTBP2Q9UKA9 531 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 BOKQ9UMX3 212 aaPredicted RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CHMP2BQ9UQN3 213 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 MRPS33Q9Y291 106 aaKnown RBP4.13□□□□□ -1.75
CKS1B-207ENST00000477676 ASB4Q9Y574 426 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 TEX264Q9Y6I9 313 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 IKBKGQ9Y6K9 419 aa4.13□□□□□ -1.75
CKS1B-207ENST00000477676 CDHR4A6H8M9 788 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ANKDD1BA6NHY2 528 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DNALI1O14645 258 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 PGRMC2O15173 223 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 NME6O75414 186 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CRLF1O75462 422 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TRAPPC6AO75865 159 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 RCBTB2O95199 551 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 GPR75O95800 540 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 PLAUP00749 431 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ABCB1P08183 1280 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CTAGE8P0CG41 777 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CPN1P15169 458 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DDCP20711 480 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CPN2P22792 545 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SLC6A2P23975 617 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 GSTM2P28161 218 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ABCD3P28288 659 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SERPINB3P29508 390 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 BSGP35613 385 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 MSH2P43246 934 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 STARP49675 285 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 HNMTP50135 292 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 LHX2P50458 406 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SLC16A1P53985 500 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 NR1H2P55055 460 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 B3GALT5-AS1P59052 145 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TNFRSF17Q02223 184 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 FUT7Q11130 342 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DLG1Q12959 904 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 CHIT1Q13231 466 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 SLAMF1Q13291 335 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 RPS6KA2Q15349 733 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ACKR1Q16570 336 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 PLAC9Q5JTB6 97 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 DEPDC1Q5TB30 811 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 TIGD3Q6B0B8 471 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 OR4C11Q6IEV9 310 aa4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF474Q6S9Z5 364 aaPredicted RBP4.12□□□□□ -1.75
CKS1B-207ENST00000477676 ZNF550Q7Z398 422 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms