RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 MANSC1Q9H8J5 431 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 SLC35C2Q9NQQ7 365 aa10.09□□□□□ -0.79
BRCA1-213ENST00000476777 PPP6CO00743 305 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 EIF3HO15372 352 aaKnown RBP eCLIP10.08□□□□□ -0.8
BRCA1-213ENST00000476777 COQ9O75208 318 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 UTS2O95399 124 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 ADAP00813 363 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 CSTF3Q12996 717 aaKnown RBP10.08□□□□□ -0.8
BRCA1-213ENST00000476777 ITGADQ13349 1161 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 P2RY6Q15077 328 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 TECRLQ5HYJ1 363 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 MROH9Q5TGP6 573 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 HBMQ6B0K9 141 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 C11orf71Q6IPW1 123 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 LETMD1Q6P1Q0 360 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 IL17RELQ6ZVW7 336 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 CREG2Q8IUH2 290 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 TUSC5Q8IXB3 177 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 FAM9CQ8IZT9 166 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 ZNF525Q8N782 197 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 BANPQ8N9N5 519 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 RNF128Q8TEB7 428 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 SELENOMQ8WWX9 145 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 HTRA1Q92743 480 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 OSTF1Q92882 214 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
BRCA1-213ENST00000476777 TBL1XR1Q9BZK7 514 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 TMEM185BQ9H7F4 350 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 SENP1Q9P0U3 644 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 KLHL13Q9P2N7 655 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 MCM8Q9UJA3 840 aa10.08□□□□□ -0.8
BRCA1-213ENST00000476777 A0A087WV62 115 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 A0A087WZY1 265 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 A0A096LPK6 155 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 A0A1W2PRB8 838 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 C7orf72A4D263 438 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 SLC35F4A4IF30 521 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 ZNF814B7Z6K7 855 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 STX16-NPEPL1H3BU86 382 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 STX16O14662 325 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 PSMG1O95456 288 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 PABPC4LP0CB38 370 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 TCP1P17987 556 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 TTKP33981 857 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 MPIP34949 423 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 RFX3P48380 749 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 CARD18P57730 90 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 RAE1P78406 368 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 ZNF239Q16600 458 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 GRAMD1BQ3KR37 738 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 TMEM201Q5SNT2 666 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 FAM120AOSQ5T036 256 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 CPTPQ5TA50 214 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 KLC3Q6P597 504 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 RPS27LQ71UM5 84 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 BHLHA15Q7RTS1 189 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 CCDC25Q86WR0 208 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 TDRPQ86YL5 185 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 PLD6Q8N2A8 252 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 CEP112Q8N8E3 955 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 C10orf105Q8TEF2 133 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 FBF1Q8TES7 1133 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 FAM168AQ92567 244 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 SLC9A6Q92581 669 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 PROX1Q92786 737 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 ZBTB8AQ96BR9 441 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 RNF145Q96MT1 663 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 Q9N2J8 555 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 MED17Q9NVC6 651 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 NMRK1Q9NWW6 199 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 VPS29Q9UBQ0 182 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 ZNF225Q9UK10 706 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 MRTO4Q9UKD2 239 aaKnown RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 SNX6Q9UNH7 406 aa10.07□□□□□ -0.8
BRCA1-213ENST00000476777 C19orf53Q9UNZ5 99 aaPredicted RBP10.07□□□□□ -0.8
BRCA1-213ENST00000476777 GOLGA8QA0A0J9YX86 632 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 GOLGA8OA6NCC3 632 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 MYO1GB0I1T2 1018 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 E7EQL1 145 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 GOLGA8NF8WBI6 632 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 GOLGA8RI6L899 631 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 UPK1AO00322 258 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 ABCD4O14678 606 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PCDH7O60245 1069 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 OTCP00480 354 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 IGKV1D-16P01601 117 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PGRP06401 933 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 CHN1P15882 459 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 USF1P22415 310 aaPredicted RBP10.06□□□□□ -0.8
BRCA1-213ENST00000476777 STX2P32856 288 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PSMD4P55036 377 aaKnown RBP10.06□□□□□ -0.8
BRCA1-213ENST00000476777 MRPS25P82663 173 aaKnown RBP10.06□□□□□ -0.8
BRCA1-213ENST00000476777 NAB1Q13506 487 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PPA1Q15181 289 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 RAB35Q15286 201 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 RNPS1Q15287 305 aaKnown RBP10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PRSS53Q2L4Q9 553 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PLPPR5Q32ZL2 321 aa10.06□□□□□ -0.8
BRCA1-213ENST00000476777 PDSS1Q5T2R2 415 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms