RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 NFYCQ13952 458 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 CYLC2Q14093 348 aaPredicted RBP13.77□□□□□ -0.21
SNX13-205ENST00000471744 TOMM20Q15388 145 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 RGNQ15493 299 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 ZNF141Q15928 474 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 ZNF630Q2M218 657 aaPredicted RBP13.77□□□□□ -0.21
SNX13-205ENST00000471744 GPAT3Q53EU6 434 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 COX20Q5RI15 118 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 DLEU7Q6UYE1 221 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 Q6ZPB1 254 aaPredicted RBP13.77□□□□□ -0.21
SNX13-205ENST00000471744 LRRC74BQ6ZQY2 392 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 SPPL2CQ8IUH8 684 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 EID3Q8N140 333 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 ZNF619Q8N2I2 560 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 FADS6Q8N9I5 356 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 PCYOX1LQ8NBM8 494 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 NEIL3Q8TAT5 605 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 DUSP19Q8WTR2 217 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 SARAFQ96BY9 339 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 AURKBQ96GD4 344 aaPredicted RBP13.77□□□□□ -0.21
SNX13-205ENST00000471744 CGREF1Q99674 301 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 OR2B2Q9GZK3 357 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 SLC25A37Q9NYZ2 338 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 VAPAQ9P0L0 249 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 DKKL1Q9UK85 242 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 DTNAQ9Y4J8 743 aa13.77□□□□□ -0.21
SNX13-205ENST00000471744 MED12Q93074 2177 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 A0A1B0GTH9 108 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 PRRG2O14669 202 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 ADAM10O14672 748 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 BCKDKO14874 412 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 PDE9AO76083 593 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 H6PDO95479 791 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 ETFAP13804 333 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 CRISP3P54108 245 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 FUT5Q11128 374 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 GPR68Q15743 365 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 TRMT5Q32P41 509 aaKnown RBP13.76□□□□□ -0.21
SNX13-205ENST00000471744 KLHL26Q53HC5 615 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 PRAMEF8Q5VWM4 474 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 PRAMEF7Q5VXH5 474 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 APOOLQ6UXV4 268 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 FRRS1Q6ZNA5 592 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 MSRB3Q8IXL7 192 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 METTL25Q8N6Q8 603 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 OR2M3Q8NG83 312 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 RP9Q8TA86 221 aaKnown RBP13.76□□□□□ -0.21
SNX13-205ENST00000471744 PRR7Q8TB68 274 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 DSN1Q9H410 356 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 SLAMF8Q9P0V8 285 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 SUCOQ9UBS9 1254 aaKnown RBP13.76□□□□□ -0.21
SNX13-205ENST00000471744 MKLN1Q9UL63 735 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 OSGIN2Q9Y236 505 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 ARL2BPQ9Y2Y0 163 aa13.76□□□□□ -0.21
SNX13-205ENST00000471744 A0A1B0GUH1 482 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 PYCARD-AS1I3L0S3 204 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 FCMRO60667 390 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 WISP2O76076 250 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 CELA3AP09093 270 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 CD1EP15812 388 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 GPX2P18283 190 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 DPP4P27487 766 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 ADH7P40394 386 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 SUMO3P55854 103 aaPredicted RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 HSF1Q00613 529 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 EIF2S3LQ2VIR3 472 aaKnown RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 GLYR1Q49A26 553 aaPredicted RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 RUNDC3AQ59EK9 446 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 OR5M10Q6IEU7 315 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 TYW3Q6IPR3 259 aaKnown RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 PIGWQ7Z7B1 504 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 MTDHQ86UE4 582 aaKnown RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 SNX32Q86XE0 403 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 ZNF614Q8N883 585 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 FAM83FQ8NEG4 500 aaPredicted RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 OR14L1PQ8NHC6 308 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 FAM57AQ8TBR7 257 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 PHOSPHO1Q8TCT1 267 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 ANKRD27Q96NW4 1050 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 SH3GL1Q99961 368 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 RTN4RQ9BZR6 473 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 SLC6A15Q9H2J7 730 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 MTHFD2LQ9H903 347 aaPredicted RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 CACYBPQ9HB71 228 aaKnown RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 A4GALTQ9NPC4 353 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 GID8Q9NWU2 228 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 TAS2R10Q9NYW0 307 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 MED11Q9P086 117 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 ARMCX1Q9P291 453 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 FBXL2Q9UKC9 423 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 LIPGQ9Y5X9 500 aa13.75□□□□□ -0.21
SNX13-205ENST00000471744 GCN1Q92616 2671 aaKnown RBP13.75□□□□□ -0.21
SNX13-205ENST00000471744 PHF3Q92576 2039 aaKnown RBP13.74□□□□□ -0.21
SNX13-205ENST00000471744 A0A087WZY1 265 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 NPIPA5A0A0B4J1W7 369 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 PRAMEF27A3QJZ7 478 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 SERINC4A6NH21 518 aa13.74□□□□□ -0.21
SNX13-205ENST00000471744 FAM47E-STBD1D6RA91 191 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms