RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 TAF1P21675 1872 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 A8MV72 311 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 H3BSA7 217 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 JRKO75564 520 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 RASAL1O95294 804 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ADAP00813 363 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 DIO3P55073 304 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 HTD2P86397 168 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 DCAF12Q5T6F0 453 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 PLD6Q8N2A8 252 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 CHCHD4Q8N4Q1 142 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TEX26Q8N6G2 289 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ZNF317Q96PQ6 595 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 SNX18Q96RF0 628 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ST6GALNAC5Q9BVH7 336 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 NXF5Q9H1B4 397 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 UNKLQ9H9P5 680 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 SERTAD4Q9NUC0 356 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SLC6A5Q9Y345 797 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 LAMB1P07942 1786 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 KCNK5O95279 499 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 KNG1P01042 644 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SERPINE2P07093 398 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 GABRR1P24046 479 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ZNF169Q14929 603 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 TBRG1Q3YBR2 411 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SHISA6Q6ZSJ9 500 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SGPP2Q8IWX5 399 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 EID2Q8N6I1 236 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 TOMM40LQ969M1 308 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 MAELQ96JY0 434 aaKnown RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 COG8Q96MW5 612 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 OR4K3Q96R72 315 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ULBP3Q9BZM4 244 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 ZNF395Q9H8N7 513 aaPredicted RBP8.22□□□□□ -1.09
HPS4-209ENST00000466781 CD93Q9NPY3 652 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 PLEK2Q9NYT0 353 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 NDUFAF4Q9P032 175 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 SLCO3A1Q9UIG8 710 aa8.22□□□□□ -1.09
HPS4-209ENST00000466781 A0A0U1RQK1 487 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 LINC01553A4QN01 128 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 RDH16O75452 317 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 FDXRP22570 491 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 CDKN2CP42773 168 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 PCBD1P61457 104 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 MOGQ16653 247 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 ZNF423Q2M1K9 1284 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 UNC50Q53HI1 259 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 HES5Q5TA89 166 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 VHLLQ6RSH7 139 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 ANKRD33Q7Z3H0 272 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 TSPAN33Q86UF1 283 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 NRMQ8IXM6 262 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 WDTC1Q8N5D0 677 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 RNF128Q8TEB7 428 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 MYLIPQ8WY64 445 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 NAT6Q93015 286 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 TWSG1Q9GZX9 223 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 ZNF355PQ9NSJ1 428 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 AIG1Q9NVV5 245 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 TMEM9Q9P0T7 183 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 ZNF223Q9UK11 482 aaPredicted RBP8.21□□□□□ -1.09
HPS4-209ENST00000466781 PTBP2Q9UKA9 531 aaKnown RBP8.21□□□□□ -1.09
HPS4-209ENST00000466781 KAT6AQ92794 2004 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 KIR2DS5A0A0G2JLQ3 304 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 A0A0G2JNG1 304 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 HMX3A6NHT5 357 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 KIR2DS3K7RE56 304 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 NDUFB2O95178 105 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 ETV5P41161 510 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 VASPP50552 380 aaPredicted RBP8.21□□□□□ -1.09
HPS4-209ENST00000466781 RRADP55042 308 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 GALNT1Q10472 559 aaPredicted RBP8.21□□□□□ -1.09
HPS4-209ENST00000466781 KIR2DS5Q14953 304 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 RPS26P11Q5JNZ5 115 aaPredicted RBP8.21□□□□□ -1.09
HPS4-209ENST00000466781 C6orf183Q5T699 404 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 MOB3CQ70IA8 216 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 SMIM15Q7Z3B0 74 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 GRAMD2AQ8IUY3 354 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 TMEM151AQ8N4L1 468 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 TRMT2BQ96GJ1 504 aaKnown RBP8.21□□□□□ -1.09
HPS4-209ENST00000466781 TMEM246Q9BRR3 403 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 DECR2Q9NUI1 292 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 SLC35A3Q9Y2D2 325 aa8.21□□□□□ -1.09
HPS4-209ENST00000466781 SSX4O60224 188 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 SERPINA7P05543 415 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 CPOXP36551 454 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 PXNP49023 591 aaPredicted RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 CHRNEQ04844 493 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 PPP1R3BQ86XI6 285 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 ZC3H3Q8IXZ2 948 aaKnown RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 CDRT4Q8N9R6 151 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 CHST14Q8NCH0 376 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 MAFAQ8NHW3 353 aaPredicted RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 LIN37Q96GY3 246 aaPredicted RBP8.21□□□□□ -1.1
HPS4-209ENST00000466781 MSANTD3Q96H12 275 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 KLHL42Q9P2K6 505 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 PCDHA9Q9Y5H5 950 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 NUMBLQ9Y6R0 609 aa8.21□□□□□ -1.1
HPS4-209ENST00000466781 HIDE1A8MVS5 230 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms