RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CREBL2O60519 120 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 OR6T1Q8NGN1 323 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ZIC5Q96T25 663 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 GDE1Q9NZC3 331 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 CLEC2DQ9UHP7 191 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 TPD52L2O43399 206 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 CDC123O75794 336 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ATF4P18848 351 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 RPS19P39019 145 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 CDC20Q12834 499 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 NNATQ16517 81 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ACSM3Q53FZ2 586 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 DCST2Q5T1A1 773 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 NANOGP1Q8N7R0 232 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 INO80EQ8NBZ0 244 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 SLC7A13Q8TCU3 470 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ADAMTS18Q8TE60 1221 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 SGPP1Q9BX95 441 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF717Q9BY31 904 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 RBFOX1Q9NWB1 397 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 KLHL9Q9P2J3 617 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 WISP3O95389 354 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ZNF20P17024 532 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 P2RY2P41231 377 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ART1P52961 327 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 EIF4EBP2Q13542 120 aaPredicted RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 FAM189A2Q15884 450 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 SAXO2Q658L1 398 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 GATSQ8NAP1 163 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 OR8K3Q8NH51 312 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 LILRB4Q8NHJ6 448 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 KLHDC7BQ96G42 594 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ANKRD19PQ9H560 264 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 SRA1Q9HD15 236 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 MGAT4CQ9UBM8 478 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 PPIEQ9UNP9 301 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ARRDC5A6NEK1 342 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 APBB3O95704 486 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 ENDOUP21128 410 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 B4GALNT1Q00973 533 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 TMED4Q7Z7H5 227 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 TANKQ92844 425 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 C7orf50Q9BRJ6 194 aaKnown RBP15.61■□□□□ 0.09
TCOF1-206ENST00000445265 MGAT4AQ9UM21 535 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 RASD1Q9Y272 281 aa15.61■□□□□ 0.09
TCOF1-206ENST00000445265 GKN3PP0CG01 181 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 PTGS2P35354 604 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 EMP3P54852 163 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 SCGB2B2Q4G0G5 96 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 RNF113BQ8IZP6 322 aaKnown RBP15.6■□□□□ 0.09
TCOF1-206ENST00000445265 OR2T4Q8NH00 348 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 C16orf58Q96GQ5 468 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 PTCHD1Q96NR3 888 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 IL21Q9HBE4 155 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 SCML1Q9UN30 329 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 A0A0X1KG70 313 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 DPM1O60762 260 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 TOXO94900 526 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 MMP11P24347 488 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 KLHL26Q53HC5 615 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 FAM26EQ8N5C1 309 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 TSTD1Q8NFU3 115 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 HAVCR2Q8TDQ0 301 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 ZMYND19Q96E35 227 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-206ENST00000445265 MRI1Q9BV20 369 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 SERINC1Q9NRX5 453 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 NUMA1Q14980 2115 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 NPIPA5E9PKD4 350 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 ETHE1O95571 254 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 CSN2P05814 226 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 SLC14A1Q13336 389 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 TMEM52BQ4KMG9 183 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 HHIPL1Q96JK4 782 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 NPIPA1Q9UND3 350 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 KHNYNO15037 678 aaKnown RBP15.6■□□□□ 0.09
TCOF1-206ENST00000445265 PRKCAP17252 672 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 S1PR1P21453 382 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 OR3A3P47888 321 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 OR3A2P47893 321 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 TP53I3Q53FA7 332 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 NXNL2Q5VZ03 156 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 C12orf40Q86WS4 652 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 ARMC10Q8N2F6 343 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 MFSD9Q8NBP5 474 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 RNASE11Q8TAA1 199 aaKnown RBP15.6■□□□□ 0.09
TCOF1-206ENST00000445265 BADQ92934 168 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 DPCDQ9BVM2 203 aaPredicted RBP15.6■□□□□ 0.09
TCOF1-206ENST00000445265 POTEKPQ9BYX7 375 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 TAS2R8Q9NYW2 309 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 POLHQ9Y253 713 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 OR51B4Q9Y5P0 310 aa15.6■□□□□ 0.09
TCOF1-206ENST00000445265 LTBP1Q14766 1721 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 LOC102723532A0A0G2JNH3 316 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 C5orf51A6NDU8 294 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 HIDE1A8MVS5 230 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RNF13O43567 381 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 HCRTR2O43614 444 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 RP2O75695 350 aa15.59■□□□□ 0.09
TCOF1-206ENST00000445265 EIF5AP63241 154 aaKnown RBP15.59■□□□□ 0.09
TCOF1-206ENST00000445265 E2F1Q01094 437 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms