RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 FBXW2Q9UKT8 454 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 RNF6Q9Y252 685 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 ATG4BQ9Y4P1 393 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 SLC22A7Q9Y694 548 aa4.4□□□□□ -1.71
PTPN4-206ENST00000441089 TRBV5-3A0A0A0MS03 114 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 A0A1W2PP18 115 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 GNG14A0A1W2PPG7 69 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 HYKKA2RU49 373 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CCDC154A6NI56 674 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 GLOD5A6NK44 160 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 MRASO14807 208 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 AIM2O14862 343 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CFLARO15519 480 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ZSCAN9O15535 394 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF749O43361 778 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ASNA1O43681 348 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TLX2O43763 284 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TBX19O60806 448 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SMPD2O60906 423 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 RDH16O75452 317 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 AIFM1O95831 613 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 UMODP07911 640 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SLC35G6P0C7Q6 338 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 FAM157CP0CG43 387 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 COX7A2P14406 83 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CD53P19397 219 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 DDCP20711 480 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PRPS1L1P21108 318 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PTPN6P29350 595 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ASMTP46597 345 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 EFNA3P52797 238 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ARFIP1P53367 373 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CLNS1AP54105 237 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 MTTPP55157 894 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 LIM2P55344 173 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TRA2BP62995 288 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 AP2B1P63010 937 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 KCNJ2P63252 427 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 MAT1AQ00266 395 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PLIN5Q00G26 463 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 DUSP2Q05923 314 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 DMTNQ08495 405 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 C2orf80Q0P641 193 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SELPLGQ14242 412 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CAPRIN1Q14444 709 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 MAPRE2Q15555 327 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SYT16Q17RD7 645 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ZNF750Q32MQ0 723 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PGS1Q32NB8 556 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 FLYWCH1Q4VC44 716 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 NDUFAF5Q5TEU4 345 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 KIRREL2Q6UWL6 708 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 DLEU7Q6UYE1 221 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 C3P1Q6ZMU1 363 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 IKBIPQ70UQ0 350 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PAGE2Q7Z2X7 111 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ANKRD46Q86W74 232 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 KBTBD2Q8IY47 623 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CLECL1Q8IZS7 167 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM132CQ8N3T6 1108 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 METTL27Q8N6F8 245 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 FAM47BQ8NA70 645 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 GLB1L3Q8NCI6 653 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SRFBP1Q8NEF9 429 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 OR9A4Q8NGU2 314 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 FAM222BQ8WU58 562 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TSPEARQ8WU66 669 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 ROBO4Q8WZ75 1007 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 GTF2H4Q92759 462 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CIDECQ96AQ7 238 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 MIEF2Q96C03 454 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CMTM5Q96DZ9 223 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SERINC2Q96SA4 455 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PIP5K1AQ99755 562 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SLC39A3Q9BRY0 314 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 INPP5KQ9BT40 448 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CADM1Q9BY67 442 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PAIP1Q9H074 479 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 LRMDAQ9H2I8 198 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 REEP4Q9H6H4 257 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SLC22A11Q9NSA0 550 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CUTCQ9NTM9 273 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TXLNGQ9NUQ3 528 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TMEM45AQ9NWC5 275 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 SLC25A37Q9NYZ2 338 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 AHSPQ9NZD4 102 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 HCN3Q9P1Z3 774 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 DHCR7Q9UBM7 475 aaKnown RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 LEF1Q9UJU2 399 aaPredicted RBP4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PACSIN3Q9UKS6 424 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CES1P1Q9UKY3 287 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 DAPP1Q9UN19 280 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 NAALAD2Q9Y3Q0 740 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 PCDHA9Q9Y5H5 950 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CLDN16Q9Y5I7 305 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 TRRAPQ9Y4A5 3859 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 CR1P17927 2039 aa4.39□□□□□ -1.71
PTPN4-206ENST00000441089 EML6Q6ZMW3 1958 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 TRAV20A0A0B4J274 112 aa4.38□□□□□ -1.71
PTPN4-206ENST00000441089 OR5H15A6NDH6 313 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms