RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HNF4AP41235 474 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 RPS9P46781 194 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TRPC1P48995 793 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCR3P51677 355 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF41P51814 821 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 HNRNPFP52597 415 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 F2RL1P55085 397 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PFN3P60673 137 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 NTHL1P78549 312 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLIN5Q00G26 463 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 IRF8Q02556 426 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 DYNC1I2Q13409 638 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 APOFQ13790 326 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 IZUMO4Q1ZYL8 232 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC36A3Q495N2 470 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 NADK2Q4G0N4 442 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SYTL3Q4VX76 610 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM98BQ52LJ0 330 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 XKR6Q5GH73 641 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SPANXN4Q5MJ08 99 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 LRIF1Q5T3J3 769 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 HENMT1Q5T8I9 393 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FRG2Q64ET8 278 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM215Q68D42 235 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 NOXRED1Q6NXP6 359 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PLBD1Q6P4A8 553 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PSRC1Q6PGN9 363 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TTC33Q6PID6 262 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM220Q6QAJ8 160 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 AGTRAPQ6RW13 159 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 B3GNT6Q6ZMB0 384 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 MSANTD1Q6ZTZ1 278 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PRSS45Q7RTY3 260 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 GPR180Q86V85 440 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SATL1Q86VE3 508 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 THOC6Q86W42 341 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CALHM3Q86XJ0 350 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 MSRB3Q8IXL7 192 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 KLHDC8AQ8IYD2 350 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 MICU2Q8IYU8 434 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 GHDCQ8N2G8 530 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 DHRSXQ8N5I4 330 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 KRTCAP2Q8N6L1 136 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 RASGEF1AQ8N9B8 481 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 AVL9Q8NBF6 648 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR52E4Q8NGH9 312 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR10A6Q8NH74 314 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLHC1Q8NHS4 586 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 MAGEE2Q8TD90 523 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 DUSP19Q8WTR2 217 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CYGBQ8WWM9 190 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FIG4Q92562 907 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 BADQ92934 168 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 GLYATL1Q969I3 302 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FAM162AQ96A26 154 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TMEM159Q96B96 161 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TESCQ96BS2 214 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PYCR2Q96C36 320 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FBXL8Q96CD0 374 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 AP2M1Q96CW1 435 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 RMND5BQ96G75 393 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 VMP1Q96GC9 406 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 ITCHQ96J02 903 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 APOLD1Q96LR9 279 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FOPNLQ96NB1 174 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCDC115Q96NT0 180 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CAMK1GQ96NX5 476 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 TSSK3Q96PN8 268 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FRG2BQ96QU4 278 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 OR52E6Q96RD3 313 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SRSF8Q9BRL6 282 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CCM2Q9BSQ5 444 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 IFT27Q9BW83 186 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 YTHDF1Q9BYJ9 559 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 ACPTQ9BZG2 426 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 B3GNT4Q9C0J1 378 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 ATG10Q9H0Y0 220 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 CLK4Q9HAZ1 481 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC35C2Q9NQQ7 365 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC6A13Q9NSD5 602 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 OLAHQ9NV23 265 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SMPD3Q9NY59 655 aaPredicted RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SLC25A37Q9NYZ2 338 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 VAPAQ9P0L0 249 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 ZNF639Q9UID6 485 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 DLGAP4Q9Y2H0 992 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 PTRH2Q9Y3E5 179 aaKnown RBP3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 FADS3Q9Y5Q0 445 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 ANKRD36A6QL64 1941 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 MIA3Q5JRA6 1907 aa3.21□□□□□ -1.9
HMGB3P11-201ENST00000440127 SCN5AQ14524 2016 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 A0A0A0MQY5 61 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 EDDM13A0A1B0GTR0 161 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 LINC01553A4QN01 128 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 ARHGEF33A8MVX0 844 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 EVPLLA8MZ36 301 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 NPIPB11E5RHQ5 1161 aa3.2□□□□□ -1.9
HMGB3P11-201ENST00000440127 C5orf67F2Z3F1 127 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms