RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 RAD52P43351 418 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 NR2C2P49116 596 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ENTPD1P49961 510 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ABATP80404 500 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 UBXN1Q04323 297 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 FAM27E3Q08E93 113 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 KLHL30Q0D2K2 578 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ANKRD20A4Q4UJ75 823 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 XKR6Q5GH73 641 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 BEX5Q5H9J7 111 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ANKRD20A2Q5SQ80 823 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 FAM120AOSQ5T036 256 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ANKRD20A1Q5TYW2 823 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ANKRD20A3Q5VUR7 823 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 SLC22A10Q63ZE4 541 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ABLIM2Q6H8Q1 611 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 FAM166AQ6J272 317 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 HSDL2Q6YN16 418 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF704Q6ZNC4 412 aaPredicted RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 QSOX2Q6ZRP7 698 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 PLD3Q8IV08 490 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 PIANPQ8IYJ0 282 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF567Q8N184 647 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 IQCF1Q8N6M8 205 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ARIH2OSQ8N7S6 290 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF611Q8N823 705 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 GPATCH11Q8N954 259 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 NFAM1Q8NET5 270 aaPredicted RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 GABPB2Q8TAK5 448 aaPredicted RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 P3H4Q92791 437 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 NCLNQ969V3 563 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 INTS12Q96CB8 462 aaKnown RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 CDKN2AIPNLQ96HQ2 116 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 PRAP1Q96NZ9 151 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 OLFM3Q96PB7 478 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 RASL10BQ96S79 203 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 SERINC2Q96SA4 455 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 PIGQQ9BRB3 760 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 CENPOQ9BU64 300 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 CARD6Q9BX69 1037 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 FAM129AQ9BZQ8 928 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ESRP2Q9H6T0 727 aaKnown RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 NLE1Q9NVX2 485 aaPredicted RBP4.37□□□□□ -1.71
SFXN1-202ENST00000421887 NSMCE4AQ9NXX6 385 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 AIPL1Q9NZN9 384 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 DNAJB11Q9UBS4 358 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 LCMT1Q9UIC8 334 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ANAPC5Q9UJX4 755 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 NFU1Q9UMS0 254 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ATG4BQ9Y4P1 393 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 CLCA3PQ9Y6N3 262 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 ROS1P08922 2347 aa4.37□□□□□ -1.71
SFXN1-202ENST00000421887 MALRD1Q5VYJ5 2156 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 KCNE1BA0A087WTH5 132 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 IGKV1-8A0A0C4DH67 115 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 KRT87PA6NCN2 255 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 IQCF5A8MTL0 148 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ZNF487B1APH4 448 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 C16orf97H3BN30 126 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CHST10O43529 356 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 SSX4O60224 188 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 OR1I1O60431 355 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RCBTB2O95199 551 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CYP1A2P05177 515 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 RFPL3SP0C7P2 107 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CCL3P10147 92 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ITGA2P17301 1181 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 HRH2P25021 359 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 DPP4P27487 766 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 PRKAR1BP31321 381 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 KRT20P35900 424 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 UGT2B10P36537 528 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CDKN1AP38936 164 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CD79BP40259 229 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 GPR143P51810 404 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 NUDT6P53370 316 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 OLR1P78380 273 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 BTG2P78543 158 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ARF1P84077 181 aaKnown RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 VLDLRP98155 873 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 WASHC5Q12768 1159 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 TFDP2Q14188 446 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CSHL1Q14406 222 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ARHGAP19Q14CB8 494 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 KRT31Q15323 416 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 GPR68Q15743 365 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 NRF1Q16656 503 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 TSTQ16762 297 aaKnown RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 ZIK1Q3SY52 487 aaPredicted RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CCSMST1Q4G0I0 132 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 DEFB134Q4QY38 66 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 FASTKD1Q53R41 847 aaKnown RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 PRAMEF20Q5VT98 475 aa4.36□□□□□ -1.71
SFXN1-202ENST00000421887 PTRHD1Q6GMV3 140 aaKnown RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CAPN13Q6MZZ7 669 aaPredicted RBP4.36□□□□□ -1.71
SFXN1-202ENST00000421887 CLEC2AQ6UVW9 174 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms