RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 HPGDP15428 266 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TCEA1P23193 301 aaKnown RBP28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DCTP40126 519 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 KHKP50053 298 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ZNF621Q6ZSS3 439 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 MAMDC2Q7Z304 686 aaPredicted RBP28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ABTB1Q969K4 478 aaPredicted RBP28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 SIKE1Q9BRV8 207 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RMND5AQ9H871 391 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 SLC6A13Q9NSD5 602 aa28.29■■■□□ 2.12
TRAF3IP1-203ENST00000409739 DOCK7Q96N67 2140 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 A0A1W2PQD3 144 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ZIC3O60481 467 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ACTL6AO96019 429 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 OR12D1P0DN82 309 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ATP4BP51164 291 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 SMSP52788 366 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GFRA1P56159 465 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GUCY1A3Q02108 690 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RCAN2Q14206 197 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GANABQ14697 944 aaKnown RBP28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ARHGAP11BQ3KRB8 267 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 FLYWCH1Q4VC44 716 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 HEPHL1Q6MZM0 1159 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RNF130Q86XS8 419 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ULK2Q8IYT8 1036 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RAB8BQ92930 207 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 PRDM14Q9GZV8 571 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ALKBH4Q9NXW9 302 aa28.28■■■□□ 2.12
TRAF3IP1-203ENST00000409739 NPIPB9F8W1W9 429 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GABRA1P14867 456 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 GCKP35557 465 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 SQLEQ14534 574 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 CD226Q15762 336 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 C1orf185Q5T7R7 199 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 TMEM211Q6ICI0 200 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 C16orf62Q7Z3J2 963 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 FUNDC1Q8IVP5 155 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 C1GALT1C1Q96EU7 318 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 ITCHQ96J02 903 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 HOXD1Q9GZZ0 328 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 PTGES2Q9H7Z7 377 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 EXD2Q9NVH0 621 aa28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 RPH3AQ9Y2J0 694 aaPredicted RBP28.27■■■□□ 2.12
TRAF3IP1-203ENST00000409739 A0A0G2JND7 137 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GMFGO60234 142 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 AGR2O95994 175 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GP1BBP13224 206 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 AGAP20933 346 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 NUP107P57740 925 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 IRX1P78414 480 aaPredicted RBP28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 FUT5Q11128 374 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 DDX59Q5T1V6 619 aaKnown RBP eCLIP28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 XKRXQ6PP77 449 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 B3GNT6Q6ZMB0 384 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 MISPQ8IVT2 679 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PM20D2Q8IYS1 436 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZNF527Q8NB42 609 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 XAGE5Q8WWM1 108 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 WDYHV1Q96HA8 205 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 SFXN2Q96NB2 322 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZNF350Q9GZX5 532 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 HHATLQ9HCP6 504 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 FGFR1OP2Q9NVK5 253 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CCDC167Q9P0B6 97 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CAMK2AQ9UQM7 478 aa28.26■■■□□ 2.11
TRAF3IP1-203ENST00000409739 HK1P19367 917 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ATP12AP54707 1039 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 B3GALT5-AS1P59052 145 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GTDC1Q4AE62 458 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 KLHL26Q53HC5 615 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ATAD3BQ5T9A4 648 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 BLOC1S3Q6QNY0 202 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 OLIG3Q7RTU3 272 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PNPT1Q8TCS8 783 aaKnown RBP28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZFP90Q8TF47 636 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 TTYH2Q9BSA4 534 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CCDC134Q9H6E4 229 aa28.25■■■□□ 2.11
TRAF3IP1-203ENST00000409739 HMGN4O00479 90 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 NR5A2O00482 541 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 STX11O75558 287 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 HOXD4P09016 255 aaPredicted RBP28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZCCHC18P0CG32 403 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PTGER4P35408 488 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 PMPCAQ10713 525 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CDSNQ15517 529 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 C6orf10Q5SRN2 563 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 AAGABQ6PD74 315 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 SLC2A7Q6PXP3 512 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GTF2H4Q92759 462 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 NMUR2Q9GZQ4 415 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ZNF385DQ9H6B1 395 aa28.24■■■□□ 2.11
TRAF3IP1-203ENST00000409739 AHRRA9YTQ3 701 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 FCMRO60667 390 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ANP32DO95626 131 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GLI4P10075 376 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 CHMP24386 653 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 RNF144AP50876 292 aaPredicted RBP28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 GPR68Q15743 365 aa28.23■■■□□ 2.11
TRAF3IP1-203ENST00000409739 ACSF3Q4G176 576 aaPredicted RBP28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms