RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 HOXD1Q9GZZ0 328 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 OR51I1Q9H343 314 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 SERHL2Q9H4I8 314 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 HHATLQ9HCP6 504 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 RNF6Q9Y252 685 aa16.29■□□□□ 0.2
PDLIM2-206ENST00000409141 NCOA6Q14686 2063 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 CCDC154A6NI56 674 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 STARP49675 285 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 GFRA1P56159 465 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 FLYWCH1Q4VC44 716 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 SAXO2Q658L1 398 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 ZNF621Q6ZSS3 439 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 CCDC71Q8IV32 467 aaPredicted RBP16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 MIPOL1Q8TD10 442 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 EBF4Q9BQW3 602 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 INPP5KQ9BT40 448 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
PDLIM2-206ENST00000409141 MED12Q93074 2177 aa16.27■□□□□ 0.2
PDLIM2-206ENST00000409141 IGLV3-32A0A0A0MS00 114 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 A0A1W2PQD3 144 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 EPPINO95925 133 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 GSNP06396 782 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 CPN1P15169 458 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 CHMP24386 653 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 GRNP28799 593 aaKnown RBP16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 CHRNB4P30926 498 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 POLR2JP52435 117 aaKnown RBP16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 STX1BP61266 288 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 SRYQ05066 204 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 GANABQ14697 944 aaKnown RBP16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF630Q2M218 657 aaPredicted RBP16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 ACSF3Q4G176 576 aaPredicted RBP16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 TNFAIP8L2Q6P589 184 aaPredicted RBP16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 MISPQ8IVT2 679 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF527Q8NB42 609 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 XAGE5Q8WWM1 108 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 NEURL3Q96EH8 262 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 C1GALT1C1Q96EU7 318 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 SDF2Q99470 211 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 EXD2Q9NVH0 621 aa16.27■□□□□ 0.19
PDLIM2-206ENST00000409141 NPIPA5A0A0B4J1W7 369 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 FAM47E-STBD1D6RA91 191 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 NPIPA7E9PJI5 369 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 AGR2O95994 175 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 AK1P00568 194 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 NPIPA8P0DM63 369 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 OR12D1P0DN82 309 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 MSX1P28360 303 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 DCTP40126 519 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 CDKN2CP42773 168 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 ATP12AP54707 1039 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 ATAD3BQ5T9A4 648 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 RAET1LQ5VY80 246 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 C16orf62Q7Z3J2 963 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 CHDHQ8NE62 594 aaPredicted RBP16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 OR9I1Q8NGQ6 314 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 RAB8BQ92930 207 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 TRIB1Q96RU8 372 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 CHST11Q9NPF2 352 aa16.26■□□□□ 0.19
PDLIM2-206ENST00000409141 CENPEQ02224 2701 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 PHF3Q92576 2039 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 H0Y3Z8 333 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 RFXANKO14593 260 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 ZFP36L2P47974 494 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 KHKP50053 298 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 B3GALT5-AS1P59052 145 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 RCAN2Q14206 197 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 ARHGAP11BQ3KRB8 267 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 KLHL26Q53HC5 615 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 HSP90B2PQ58FF3 399 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 ZNF787Q6DD87 383 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 OR5M1Q8NGP8 315 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 LILRB4Q8NHJ6 448 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 PHOSPHO1Q8TCT1 267 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 THOC1Q96FV9 657 aaKnown RBP16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 SH3YL1Q96HL8 342 aaPredicted RBP16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 PIGQQ9BRB3 760 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 RMND5AQ9H871 391 aa16.25■□□□□ 0.19
PDLIM2-206ENST00000409141 A0A0G2JNJ9 132 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 FAM234BA2RU67 622 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 KDM4EB2RXH2 506 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 H3BNH8 94 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 FCMRO60667 390 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 EDF1O60869 148 aaKnown RBP16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 STX11O75558 287 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ANP32DO95626 131 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 C1QCP02747 245 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ADH7P40394 386 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 LHX2P50458 406 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 RNF144AP50876 292 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 GPR68Q15743 365 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 CD226Q15762 336 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 GLYR1Q49A26 553 aaPredicted RBP16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 TIGD2Q4W5G0 525 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 RIPPLY2Q5TAB7 128 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 NSUN5P2Q63ZY6 315 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 ARSKQ6UWY0 536 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 MSANTD1Q6ZTZ1 278 aa16.24■□□□□ 0.19
PDLIM2-206ENST00000409141 SEM1Q6ZVN7 128 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms