RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 CLCA3PQ9Y6N3 262 aa12.22□□□□□ -0.45
PRAME-201ENST00000398741 DENND4AQ7Z401 1863 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 ANKRD34BA5PLL1 514 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 C12orf71A8MTZ7 269 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 RNF13O43567 381 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 SCO2O43819 266 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 TRIM3O75382 744 aaPredicted RBP12.21□□□□□ -0.45
PRAME-201ENST00000398741 CLDN2P57739 230 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 BDH1Q02338 343 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 CSTF1Q05048 431 aaKnown RBP12.21□□□□□ -0.45
PRAME-201ENST00000398741 SF3A2Q15428 464 aaKnown RBP12.21□□□□□ -0.45
PRAME-201ENST00000398741 GPR68Q15743 365 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 EOGTQ5NDL2 527 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 PAMR1Q6UXH9 720 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 ZNF438Q7Z4V0 828 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 ASPGQ86U10 573 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 AMIGO1Q86WK6 493 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 SAMD14Q8IZD0 417 aaPredicted RBP12.21□□□□□ -0.45
PRAME-201ENST00000398741 ACBD7Q8N6N7 88 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 DUSP18Q8NEJ0 188 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 OR4E2Q8NGC2 313 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 FANK1Q8TC84 345 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 ACOT12Q8WYK0 555 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 RIPOR3Q96MK2 946 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 JAM3Q9BX67 310 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 C1QTNF2Q9BXJ5 285 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 DPH1Q9BZG8 443 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 RNF32Q9H0A6 362 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 OR52D1Q9H346 318 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 UBQLN3Q9H347 655 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 ISG20L2Q9H9L3 353 aaKnown RBP12.21□□□□□ -0.45
PRAME-201ENST00000398741 ALG5Q9Y673 324 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 CDH23Q9H251 3354 aa12.21□□□□□ -0.45
PRAME-201ENST00000398741 GTPBP1O00178 669 aaKnown RBP12.21□□□□□ -0.46
PRAME-201ENST00000398741 RFXAPO00287 272 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 BTN3A3O00478 584 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 SLC35G6P0C7Q6 338 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 BMP7P18075 431 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 GALP22466 123 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 ALAS2P22557 587 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 RPS15AP62244 130 aaKnown RBP12.21□□□□□ -0.46
PRAME-201ENST00000398741 TNFRSF17Q02223 184 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 RIN1Q13671 783 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 CCDC85BQ15834 202 aaPredicted RBP12.21□□□□□ -0.46
PRAME-201ENST00000398741 ARHGAP11BQ3KRB8 267 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 IDNKQ5T6J7 187 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 VASNQ6EMK4 673 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 B3GLCTQ6Y288 498 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 ABI3BPQ7Z7G0 1075 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 ADGRD2Q7Z7M1 963 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 TCTE3Q8IZS6 198 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 OR4K14Q8NGD5 310 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 OR14C36Q8NHC7 312 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 PHOSPHO2Q8TCD6 241 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 SENP5Q96HI0 755 aaPredicted RBP12.21□□□□□ -0.46
PRAME-201ENST00000398741 C10orf90Q96M02 699 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 CD180Q99467 661 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 TBX5Q99593 518 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 GDF15Q99988 308 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 ALG8Q9BVK2 526 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 KIR3DX1Q9H7L2 352 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 PHF11Q9UIL8 331 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 KLHL21Q9UJP4 597 aa12.21□□□□□ -0.46
PRAME-201ENST00000398741 A0A1W2PQU0 124 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 SGK494L7N484 410 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 ORC5O43913 435 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 RNF144AP50876 292 aaPredicted RBP12.2□□□□□ -0.46
PRAME-201ENST00000398741 CLDN20P56880 219 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 DUSP5Q16690 384 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 KLHL12Q53G59 568 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 NIPAL3Q6P499 406 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 TMEM91Q6ZNR0 172 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 NUDT18Q6ZVK8 323 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 DGLUCYQ7Z3D6 616 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 VN1R4Q7Z5H5 301 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 PAQR7Q86WK9 346 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 OR4N5Q8IXE1 308 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 YAF2Q8IY57 180 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 YIPF7Q8N8F6 280 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 NLGN4YQ8NFZ3 816 aaPredicted RBP12.2□□□□□ -0.46
PRAME-201ENST00000398741 GRPEL2Q8TAA5 225 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 ZCCHC10Q8TBK6 192 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 BRIX1Q8TDN6 353 aaKnown RBP12.2□□□□□ -0.46
PRAME-201ENST00000398741 C1QTNF7Q9BXJ2 289 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 SLC17A9Q9BYT1 436 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 HDHD2Q9H0R4 259 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 TRIM36Q9NQ86 728 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 RPRD1BQ9NQG5 326 aaKnown RBP12.2□□□□□ -0.46
PRAME-201ENST00000398741 BABAM2Q9NXR7 383 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 OR6C2Q9NZP2 312 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 CHD9Q3L8U1 2897 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 HEATR5BQ9P2D3 2071 aa12.2□□□□□ -0.46
PRAME-201ENST00000398741 DAPL1A0PJW8 107 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 TRAPPC13A5PLN9 417 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 PRR19A6NJB7 356 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 RNGTTO60942 597 aaKnown RBP12.19□□□□□ -0.46
PRAME-201ENST00000398741 APODP05090 189 aa12.19□□□□□ -0.46
PRAME-201ENST00000398741 MYOGP15173 224 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms