RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 GTDC1Q4AE62 458 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 GPAT3Q53EU6 434 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 KLHL26Q53HC5 615 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 PAGE3Q5JUK9 113 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 COX20Q5RI15 118 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 WLSQ5T9L3 541 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 MTFR2Q6P444 385 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 TSPEARQ8WU66 669 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 ROPN1LQ96C74 230 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 OR2B2Q9GZK3 357 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 NMUR2Q9GZQ4 415 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 TAS2R10Q9NYW0 307 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 SPRR3Q9UBC9 169 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 LEF1Q9UJU2 399 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 NDUFAF1Q9Y375 327 aa17.28■□□□□ 0.36
PDLIM7-204ENST00000393546 IGLV3-32A0A0A0MS00 114 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 NPIPA5A0A0B4J1W7 369 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 C17orf51A8MQB3 221 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 NPIPA7E9PJI5 369 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 CLIC1O00299 241 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 FCMRO60667 390 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 SNRPB2P08579 225 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 NPIPA8P0DM63 369 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 CD1EP15812 388 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 ENDOUP21128 410 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 MSX1P28360 303 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 CRATP43155 626 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 LRIF1Q5T3J3 769 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 MTERF4Q7Z6M4 381 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 GATSQ8NAP1 163 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 OR5M9Q8NGP3 310 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 PHOSPHO1Q8TCT1 267 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 SSC4DQ8WTU2 575 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 ZNF350Q9GZX5 532 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 TP63Q9H3D4 680 aaPredicted RBP17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 RAD21L1Q9H4I0 556 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 TNFRSF10DQ9UBN6 386 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 MKLN1Q9UL63 735 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 SLC6A5Q9Y345 797 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 WDR45Q9Y484 360 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 DTNAQ9Y4J8 743 aa17.27■□□□□ 0.36
PDLIM7-204ENST00000393546 DIDO1Q9BTC0 2240 aaKnown RBP17.27■□□□□ 0.35
PDLIM7-204ENST00000393546 E9PLN8 166 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 NPIPB9F8W1W9 429 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 GTPBP1O00178 669 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 ANGPT2O15123 496 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 ZIC3O60481 467 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 HK1P19367 917 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 GYS2P54840 703 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 HPCAP84074 193 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 GANABQ14697 944 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 NHSL2Q5HYW2 709 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 AP1ARQ63HQ0 302 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF585AQ6P3V2 769 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF614Q8N883 585 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 C10orf82Q8WW14 230 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 ABTB1Q969K4 478 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 AURKBQ96GD4 344 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 TRNT1Q96Q11 434 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 VKORC1Q9BQB6 163 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 SAP130Q9H0E3 1048 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 SAR1AQ9NR31 198 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 PNPLA3Q9NST1 481 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 THUMPD1Q9NXG2 353 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 ALKBH4Q9NXW9 302 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 SLAMF8Q9P0V8 285 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 MEMO1Q9Y316 297 aa17.26■□□□□ 0.35
PDLIM7-204ENST00000393546 PCNX3Q9H6A9 2034 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 B4DXG7 233 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 ACTL6AO96019 429 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 LDLRP01130 860 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 NR2F1P10589 423 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 ETFAP13804 333 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 BMP7P18075 431 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 PPIBP23284 216 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 LSP1P33241 339 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 MVDP53602 400 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 SEC24CP53992 1094 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF141Q15928 474 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 SYPL1Q16563 259 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 ZNF630Q2M218 657 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 EMC4Q5J8M3 183 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 VASNQ6EMK4 673 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 TMEM211Q6ICI0 200 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 AAGABQ6PD74 315 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 C3P1Q6ZMU1 363 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 LRRC74BQ6ZQY2 392 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 OLIG3Q7RTU3 272 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 IFNEQ86WN2 208 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 OIT3Q8WWZ8 545 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 C1GALT1C1Q96EU7 318 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 SH3YL1Q96HL8 342 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 TIMP4Q99727 224 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 ELAC2Q9BQ52 826 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 UGT2B28Q9BY64 529 aa17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 NSRP1Q9H0G5 558 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 RPH3AQ9Y2J0 694 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-204ENST00000393546 PRAMEF27A3QJZ7 478 aa17.24■□□□□ 0.35
PDLIM7-204ENST00000393546 GMNCA6NCL1 334 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms