RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TRIP11Q15643 1979 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 SULT1C2O00338 296 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 TP53I11O14683 189 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MAOAP21397 527 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 DRD1P21728 446 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 DLSTP36957 453 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ERVFC1P60507 584 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 FAM69AQ5T7M9 428 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 LEG1Q6P5S2 330 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 OR9Q2Q8NGE9 314 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 GLYATL2Q8WU03 294 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MRI1Q9BV20 369 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MCOLN1Q9GZU1 580 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 CD300AQ9UGN4 299 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MEGF11A6BM72 1044 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ALDOBP05062 364 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 HEXBP07686 556 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF140P52738 457 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ERVK-25P63136 954 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 SELENOWP63302 87 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MRPL49Q13405 166 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 PAGE3Q5JUK9 113 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF852Q6ZMS4 543 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC7A13Q8TCU3 470 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 DCUN1D4Q92564 292 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC41A3Q96GZ6 507 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 SLC17A9Q9BYT1 436 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ANKMY1Q9P2S6 941 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 PEX12O00623 359 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 CDC123O75794 336 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 FGF4P08620 206 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 IDH3GP51553 393 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 NKX6-1P78426 367 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF33BQ06732 778 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 DPPA4Q7L190 304 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 C16orf78Q8WTQ4 265 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 ALG8Q9BVK2 526 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 OR51E2Q9H255 320 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 SYNPO2LQ9H987 977 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MEIOCA2RUB1 952 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 CSF1P09603 554 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 GTDC1Q4AE62 458 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MANEALQ5VSG8 457 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 TMEM150AQ86TG1 271 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MDGA1Q8NFP4 955 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 PTERQ96BW5 349 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 BOCQ9BWV1 1114 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 C20orf27Q9GZN8 174 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 MFFQ9GZY8 342 aa11.59□□□□□ -0.55
NPLOC4-202ENST00000374747 TNFRSF1BP20333 461 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 HOXD9P28356 352 aaPredicted RBP11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 POU3F4P49335 361 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 RPS15AP62244 130 aaKnown RBP11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 VEZF1Q14119 521 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 NNATQ16517 81 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 AGAP6Q5VW22 663 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 RNF111Q6ZNA4 994 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 DCP2Q8IU60 420 aaKnown RBP11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 ADGRG5Q8IZF4 528 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 AGAP4Q96P64 663 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 ZNF436Q9C0F3 470 aaPredicted RBP11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 TMPRSS11EQ9UL52 423 aa11.58□□□□□ -0.55
NPLOC4-202ENST00000374747 RTCAO00442 366 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 POLR1CO15160 346 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 SOX3P41225 446 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 MRPS10P82664 201 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 AWAT2Q6E213 333 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 KIAA1211LQ6NV74 962 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 CNTN4Q8IWV2 1026 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 ALDH16A1Q8IZ83 802 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 SNAPC3Q92966 411 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 IL17FQ96PD4 163 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 DPH7Q9BTV6 452 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 LDAHQ9H6V9 325 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 PLAC1Q9HBJ0 212 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 RNF215Q9Y6U7 377 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 PRSS56P0CW18 603 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 GGT2P36268 569 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 NR0B1P51843 470 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 AKR1C2P52895 323 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 TAS2R31P59538 309 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 GALK2Q01415 458 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 SEMA3BQ13214 749 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 HSF5Q4G112 596 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 TMEM185AQ8NFB2 350 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 RRNAD1Q96FB5 475 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 LMF1Q96S06 567 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 VRK1Q99986 396 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 INPP5KQ9BT40 448 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 THAP7Q9BT49 309 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 SLC12A9Q9BXP2 914 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 MKRN2Q9H000 416 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 PPA2Q9H2U2 334 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 MTHFD2LQ9H903 347 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 THSD1Q9NS62 852 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 RNH1P13489 461 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 CERS1P27544 350 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 CTHP32929 405 aa11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 RPL34P49207 117 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-202ENST00000374747 BCL2A1Q16548 175 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms