RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CAPZBP47756 277 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 GPR68Q15743 365 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 PRTGQ2VWP7 1150 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 PMS2CLQ68D20 193 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 ACSM5Q6NUN0 579 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 ATCAYQ86WG3 371 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 KIF18BQ86Y91 864 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 TMEFF1Q8IYR6 380 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 SLC43A2Q8N370 569 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 IQCF1Q8N6M8 205 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 C7orf57Q8NEG2 295 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 FGF11Q92914 225 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 FAM46AQ96IP4 442 aaKnown RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 SLC6A18Q96N87 628 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 OR5M11Q96RB7 305 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 ZNF559Q9BR84 538 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 CHCHD6Q9BRQ6 235 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 PELOQ9BRX2 385 aaKnown RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 CTPS2Q9NRF8 586 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 NDUFB11Q9NX14 153 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 CRNNQ9UBG3 495 aaPredicted RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 EPHA6Q9UF33 1036 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 DOLKQ9UPQ8 538 aa13.03□□□□□ -0.32
USF1-202ENST00000368020 TDRD6O60522 2096 aaKnown RBP13.03□□□□□ -0.32
USF1-202ENST00000368020 CDHR4A6H8M9 788 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 HRO43593 1189 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 CSO75390 466 aaKnown RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 CELA2BP08218 269 aaPredicted RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 SP9P0CG40 484 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ST6GAL1P15907 406 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 CD38P28907 300 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 MTNR1AP48039 350 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 PRKCDQ05655 676 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 ANGPT1Q15389 498 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 TRIM16LQ309B1 348 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ZNF613Q6PF04 617 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ZNF620Q6ZNG0 422 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 PRICKLE2Q7Z3G6 844 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 WDR53Q7Z5U6 358 aaPredicted RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ZBTB46Q86UZ6 589 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 GALNT12Q8IXK2 581 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 CDK20Q8IZL9 346 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 CENPSQ8N2Z9 138 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ARHGEF39Q8N4T4 335 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 DRAXINQ8NBI3 349 aaPredicted RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 OR2T33Q8NG76 320 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 OR6C4Q8NGE1 309 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 OR52L1Q8NGH7 329 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 OR52I1Q8NGK6 324 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 ABTB1Q969K4 478 aaPredicted RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 ANKRD9Q96BM1 317 aaPredicted RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 HS6ST2Q96MM7 605 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 GPA33Q99795 319 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 LMF2Q9BU23 707 aaKnown RBP13.02□□□□□ -0.32
USF1-202ENST00000368020 MROQ9BYG7 248 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 OR51E2Q9H255 320 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 EGLN3Q9H6Z9 239 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 KLHL3Q9UH77 587 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 SLC7A7Q9UM01 511 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 STUB1Q9UNE7 303 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 KMT2EQ8IZD2 1858 aa13.02□□□□□ -0.32
USF1-202ENST00000368020 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 A0A1W2PR77 199 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 SGK494L7N484 410 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 FRS3O43559 492 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 NSA2O95478 260 aaKnown RBP13.02□□□□□ -0.33
USF1-202ENST00000368020 BMP4P12644 408 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 ZNF136P52737 540 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 PSMD4P55036 377 aaKnown RBP13.02□□□□□ -0.33
USF1-202ENST00000368020 WNT4P56705 351 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 MGAT2Q10469 447 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 PLK5Q496M5 336 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 ZNF542PQ5EBM4 170 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 TCTE1Q5JU00 501 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 ARMC4Q5T2S8 1044 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 MRPL2Q5T653 305 aaKnown RBP13.02□□□□□ -0.33
USF1-202ENST00000368020 PRSS41Q7RTY9 318 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 ZNF438Q7Z4V0 828 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 GRAMD2AQ8IUY3 354 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 NRMQ8IXM6 262 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 ANKK1Q8NFD2 765 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 BRIX1Q8TDN6 353 aaKnown RBP13.02□□□□□ -0.33
USF1-202ENST00000368020 OIT3Q8WWZ8 545 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 RBM18Q96H35 190 aaKnown RBP13.02□□□□□ -0.33
USF1-202ENST00000368020 COL25A1Q9BXS0 654 aaPredicted RBP13.02□□□□□ -0.33
USF1-202ENST00000368020 PLA2G12AQ9BZM1 189 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 TAS2R16Q9NYV7 291 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 SSR3Q9UNL2 185 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 CABIN1Q9Y6J0 2220 aa13.02□□□□□ -0.33
USF1-202ENST00000368020 A0A075B6Q4 140 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 CHST10O43529 356 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
USF1-202ENST00000368020 CTNSO60931 367 aa13.01□□□□□ -0.33
USF1-202ENST00000368020 RDH16O75452 317 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms