RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 IGLL1P15814 213 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 PTPN6P29350 595 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 FUT7Q11130 342 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 ST3GAL3Q11203 375 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 AGBL2Q5U5Z8 902 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 OR6B2Q6IFH4 312 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 TAF8Q7Z7C8 310 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 PPP1R27Q86WC6 154 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 SERPINA9Q86WD7 417 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 BATF2Q8N1L9 274 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 RDH5Q92781 318 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 SLC25A36Q96CQ1 311 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 TBC1D10AQ9BXI6 508 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 SLC25A39Q9BZJ4 359 aaPredicted RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 NXF3Q9H4D5 531 aaKnown RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 KAT8Q9H7Z6 458 aaKnown RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 GPN2Q9H9Y4 310 aaPredicted RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 NANSQ9NR45 359 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 RBM28Q9NW13 759 aaKnown RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 P2RX2Q9UBL9 471 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 LCMT1Q9UIC8 334 aa2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 UBQLN1Q9UMX0 589 aaKnown RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.78□□□□□ -1.96
RNU4-28P-201ENST00000364739 FAM170AA1A519 330 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF264O43296 627 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 TRAF3IP2O43734 574 aaPredicted RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 CXCL10P02778 98 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 AHCYP23526 432 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 ADSSP30520 456 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 RPS10P46783 165 aaKnown RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 EMDP50402 254 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 TIMM10P62072 90 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 CBX3Q13185 183 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 C2orf76Q3KRA6 126 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 ETFRF1Q6IPR1 90 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 IFNEQ86WN2 208 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 C7orf33Q8WU49 177 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 CCDC43Q96MW1 224 aaKnown RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 SMIM14Q96QK8 99 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 ALDH8A1Q9H2A2 487 aaPredicted RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 SYTL2Q9HCH5 934 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 TRPV5Q9NQA5 729 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 C1orf123Q9NWV4 160 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 CNOT2Q9NZN8 540 aaKnown RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 KCNN3Q9UGI6 736 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 ZNF490Q9ULM2 529 aaPredicted RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 NAP1L2Q9ULW6 460 aaPredicted RBP2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 GMPPBQ9Y5P6 360 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 USP16Q9Y5T5 823 aa2.77□□□□□ -1.97
RNU4-28P-201ENST00000364739 SCN2AQ99250 2005 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 MTCL1Q9Y4B5 1905 aaKnown RBP2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 A0A1B0GUA9 196 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 H3BTX0 84 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 SLC4A1P02730 911 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 GCKP35557 465 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 NUMBP49757 651 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 PPOXP50336 477 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 YBEYP58557 167 aaPredicted RBP2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 RND3P61587 244 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 EBI3Q14213 229 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 MPPED2Q15777 294 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 CDKN3Q16667 212 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 TFDP3Q5H9I0 405 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 OLFM4Q6UX06 510 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 HSD11B1LQ7Z5J1 315 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 C17orf82Q86X59 251 aaPredicted RBP2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 ARIH2OSQ8N7S6 290 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 C20orf203Q8NBC4 194 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 TAF4BQ92750 862 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 TXN2Q99757 166 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 ACAT2Q9BWD1 397 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 XPO7Q9UIA9 1087 aaKnown RBP2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 RIMS3Q9UJD0 308 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 SAMD4AQ9UPU9 718 aaKnown RBP2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 CACNG2Q9Y698 323 aa2.76□□□□□ -1.97
RNU4-28P-201ENST00000364739 PARD3Q8TEW0 1356 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 IGLV3-16A0A075B6K0 115 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 SMIM28A0A1B0GU29 152 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 K7N7A8 449 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 FCN1O00602 326 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 MAGEB4O15481 346 aaPredicted RBP2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 TRIM3O75382 744 aaPredicted RBP2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 NDUFA7O95182 113 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 IGHV3-48P01763 117 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 AQP1P29972 269 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 UGT1A5P35504 534 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 CTRLP40313 264 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 GNPDA1P46926 289 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 LINC00315P59091 139 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 EOGTQ5NDL2 527 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 DCST2Q5T1A1 773 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 METTL11BQ5VVY1 283 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 ASPHD2Q6ICH7 369 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 LPCAT2Q7L5N7 544 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 FAM220AQ7Z4H9 259 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 SYVN1Q86TM6 617 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 CERS5Q8N5B7 392 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 TMEM252Q8N6L7 170 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 TMEM101Q96IK0 257 aa2.75□□□□□ -1.97
RNU4-28P-201ENST00000364739 NFKBIZQ9BYH8 718 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms