RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 XPO4Q9C0E2 1151 aaKnown RBP4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF696Q9H7X3 374 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 DCLRE1BQ9H816 532 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 VIPAS39Q9H9C1 493 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 PLCXD1Q9NUJ7 323 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 RBAKQ9NYW8 714 aaPredicted RBP4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 ZNF319Q9P2F9 582 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 DEC1Q9P2X7 70 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 CLEC4EQ9ULY5 219 aa4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 MRPS28Q9Y2Q9 187 aaKnown RBP4.78□□□□□ -1.64
RNU4-39P-201ENST00000362455 RNF103-CHMP3A0A140T963 221 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 RNF103O00237 685 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 SIGLEC5O15389 551 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 CACNG3O60359 315 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 IGHEP01854 428 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZNF18P17022 549 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 C4BPBP20851 252 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 MAPK3P27361 379 aaPredicted RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 LONP1P36776 959 aaKnown RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 PITPNBP48739 271 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 HNRNPFP52597 415 aaKnown RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 C3AR1Q16581 482 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 HLA-BQ31612 363 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 KRTAP24-1Q3LI83 254 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 TMEM215Q68D42 235 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 ARHGAP11AQ6P4F7 1023 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 DLEU7Q6UYE1 221 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 Q6ZRP5 223 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 Q6ZVQ6 151 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 CHMP1BQ7LBR1 199 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 NOTCH2NLQ7Z3S9 236 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 ADAMTSL2Q86TH1 951 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 NLRP14Q86W24 1093 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 TMEM185AQ8NFB2 350 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 GPR148Q8TDV2 347 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 ACCSQ96QU6 501 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 LITAFQ99732 161 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 PAPOLGQ9BWT3 736 aaKnown RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 GPR174Q9BXC1 333 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 HOXD1Q9GZZ0 328 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 DDX47Q9H0S4 455 aaKnown RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 ABCG4Q9H172 646 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 PRORYQ9H606 182 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 FNDC4Q9H6D8 234 aaPredicted RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 NMUR1Q9HB89 426 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 PLEK2Q9NYT0 353 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 NINJ2Q9NZG7 142 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 TMEM181Q9P2C4 612 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 OR1A2Q9Y585 309 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 URB1O60287 2271 aaKnown RBP4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 ATG2BQ96BY7 2078 aa4.77□□□□□ -1.65
RNU4-39P-201ENST00000362455 EML5Q05BV3 1969 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 PCDH15Q96QU1 1955 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 MYO18BQ8IUG5 2567 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 A0A087WYN8 130 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 A0A087X002 238 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 C10orf142B7Z368 130 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 NEDD8-MDP1E9PL57 170 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 B4GAT1O43505 415 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 CALCAP01258 141 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 IGLV3-19P01714 112 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 ZNF883P0CG24 379 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 CFC1BP0CG36 223 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 CFC1P0CG37 223 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 ANXA13P27216 316 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 GIFP27352 417 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 STIP1P31948 543 aaKnown RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 MMP12P39900 470 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 TSFMP43897 325 aaKnown RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 NSFP46459 744 aaKnown RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 CSNK1EP49674 416 aaKnown RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 TPMTP51580 245 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCR4P51679 360 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 MYL6P60660 151 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM173BQ6P4H8 233 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 TPGS1Q6ZTW0 290 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 SCD5Q86SK9 330 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 GPD1LQ8N335 351 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 CCDC197Q8NCU1 140 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 KNL1Q8NG31 2342 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 SETD7Q8WTS6 366 aaKnown RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 GLYATL1Q969I3 302 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 FBXO32Q969P5 355 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 OTUB2Q96DC9 234 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 ERGIC2Q96RQ1 377 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 S1PR3Q99500 378 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 DGCR6LQ9BY27 220 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 C1orf21Q9H246 121 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM124BQ9H5Z6 455 aaPredicted RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 SMYD3Q9H7B4 428 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 MARCH7Q9H992 704 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 FGF22Q9HCT0 170 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 S100A14Q9HCY8 104 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 FAM212BQ9NTI7 297 aaPredicted RBP4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 NDUFA13Q9P0J0 144 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 HMGXB4Q9UGU5 601 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 TEKT2Q9UIF3 430 aa4.76□□□□□ -1.65
RNU4-39P-201ENST00000362455 SPTA1P02549 2419 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms