RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 APEX1P27695 318 aaKnown RBP8.02□□□□□ -1.13
TRIM55-204ENST00000353317 NDUFS1P28331 727 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 MLLT3P42568 568 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-204ENST00000353317 WNT4P56705 351 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 SYPL1Q16563 259 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 PLK5Q496M5 336 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF628Q5EBL2 1059 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.02□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF730Q6ZMV8 503 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 OLIG3Q7RTU3 272 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 HMGN2P46Q86SG4 172 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 LAPTM4BQ86VI4 370 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 OR7G1Q8NGA0 311 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 OR5P2Q8WZ92 322 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 MS4A6EQ96DS6 147 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 SPACA7Q96KW9 195 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 OR2A5Q96R48 311 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 SARGQ9BW04 601 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 PRRG3Q9BZD7 231 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 PLA2G12AQ9BZM1 189 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 PRDM7Q9NQW5 492 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 MAN2C1Q9NTJ4 1040 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 POT1Q9NUX5 634 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 PILRAQ9UKJ1 303 aa8.02□□□□□ -1.13
TRIM55-204ENST00000353317 MRPS2Q9Y399 296 aaKnown RBP8.02□□□□□ -1.13
TRIM55-204ENST00000353317 KIR2DS5A0A0G2JLQ3 304 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 A0A0G2JNG1 304 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 A0A1W2PRQ8 180 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 NOTOA8MTQ0 251 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 KIR2DS3K7RE56 304 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 PDPK1O15530 556 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 NDUFS4O43181 175 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 PIAS2O75928 621 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 PDE9AO76083 593 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 OR12D1P0DN82 309 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 PTGER1P34995 402 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CD79BP40259 229 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 MAN2A2P49641 1150 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 BLKP51451 505 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 MAPK12P53778 367 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 PCBP4P57723 403 aaKnown RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 RAB8AP61006 207 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 FABP5Q01469 135 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ALDH6A1Q02252 535 aaKnown RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CSTF1Q05048 431 aaKnown RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 KIR2DS5Q14953 304 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 P2RY14Q15391 338 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 TATDN3Q17R31 274 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 FAM214AQ32MH5 1076 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CCDC58Q4VC31 144 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CRTC2Q53ET0 693 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 SLC25A30Q5SVS4 291 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 C17orf82Q86X59 251 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 MEX3DQ86XN8 651 aaKnown RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 RAB42Q8N4Z0 105 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 NLGN4YQ8NFZ3 816 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 OR4K5Q8NGD3 323 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 OR5D16Q8NGK9 328 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ENKURQ8TC29 256 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CTPS2Q9NRF8 586 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ACOXLQ9NUZ1 547 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 TOR4AQ9NXH8 423 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 COMMD3Q9UBI1 195 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 FBXW2Q9UKT8 454 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 GPR52Q9Y2T5 361 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 OR6C70A6NIJ9 312 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 TNFSF14O43557 240 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 SLC28A2O43868 658 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 EPPINO95925 133 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 NR2F6P10588 404 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 MYL12AP19105 171 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CMPK1P30085 196 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 HOXA6P31267 233 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 DHPSP49366 369 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ABATP80404 500 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CDK5Q00535 292 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 COX10Q12887 443 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 EFR3AQ14156 821 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 KIR2DS3Q14952 304 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 SNAPC1Q16533 368 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 SPDYE7PQ495Y7 208 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 C3orf38Q5JPI3 329 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 NKAIN2Q5VXU1 208 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 FIGLAQ6QHK4 219 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 SLC36A4Q6YBV0 504 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 SHFQ7M4L6 423 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 PRSS41Q7RTY9 318 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 CADM2Q8N3J6 435 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 TBC1D19Q8N5T2 526 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 YIPF7Q8N8F6 280 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ZFP41Q8N8Y5 198 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 OR2I1PQ8NGU4 316 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 OR8K5Q8NH50 307 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 UBE2E3Q969T4 207 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ZBED6CLQ96FA7 236 aaPredicted RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 DCLRE1CQ96SD1 692 aaKnown RBP8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ZNF607Q96SK3 696 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 MED18Q9BUE0 208 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 EGLN3Q9H6Z9 239 aa8.01□□□□□ -1.13
TRIM55-204ENST00000353317 ANKRA2Q9H9E1 313 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms